28825 Chitin_synth_CThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
28825	chr_6	Chitin_synth_C	1928271	1931187	-	Chitin_synth_C

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446358	Thaps28825.2, Thaps28825.3, Thaps28825.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0302

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0273	0.40	0.4 55

Most Highly Correlated Transcripts

21559 hypothetical protein 0.9519	25357 hypothetical protein 0.9351	bd884 (bd884) NA 0.9075	8365 hypothetical protein 0.8972	23932 hypothetical protein 0.8914	bd1823 (bd1823) SCP superfamily 0.8913
24818 hypothetical protein 0.8887	3975 hypothetical protein 0.874	24858 hypothetical protein 0.8738	263121 Peptidase_M8 superfamily 0.8695

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chitin_synth_C		C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-...	cl11394	275.726	9.46E-86	281 - 610	specific	133033
Glyco_tranf_GTA_type superfamily		Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a...	-	275.726	9.46E-86	281 - 610	superfamily	264347
COG1215		Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer...	-	96.9301	1.96E-21	239 - 728	multi-dom	224136

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Amino sugar and nucleotide sugar metabolism	map00520

GO Terms

GO:0016758 GO:0004100 -

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