29375 Chloroa_b-bind
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
29375 chr_9 Chloroa_b-bind 1105520 1106038 + Chloroa_b-bind

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps29375.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0022

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0262
 0.15

Most Highly Correlated Transcripts

24080

(Lhcr1) fucoxanthin chl a/c light-harvesting protein, lhcr type
0.998

bd1820

(bd1820) Fasciclin
0.992

270210

(PsbO) oxygen-evolving enhancer protein 1 precursor
0.9886

bd218

(bd218) Chloroa_b-bind superfamily
0.9878

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9853

29842

Rieske_2
0.9835

40747

Chloroa_b-bind
0.9823

26246

(Lhcr3) fucoxanthin chl a/c light-harvesting protein
0.9815

21472

NA
0.9781

11501

(FCP3) Chloroa_b-bind
0.9736

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. cl02879 115.097 1.06E-32 29 - 165 specific 249913
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 115.097 1.06E-32 29 - 165 superfamily 261492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11006 PHATRDRAFT_11006 270184 318577 441453 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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