32206 Fer4_15Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
32206	chr_2	Fer4_15	2215274	2216485	+	Fer4_15

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452895	Thaps32206.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0209

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0130	0.40	0.00008 4.1

Most Highly Correlated Transcripts

bd1161 (bd1161) NA 0.9273	bd1893 (bd1893) NA 0.9209	268592 VDE superfamily 0.8827	33663 PLN02649 0.8825	bd634 (bd634) NA 0.8825	bd789 (bd789) ABC_ATPase superfamily 0.8809
bd758 (bd758) NA 0.8808	bd463 (bd463) Aa_trans superfamily 0.8793	bd718 (bd718) PRK10387 0.8789	31169 PRX_BCP 0.8773

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Fer4_15		4Fe-4S single cluster domain; 4Fe-4S single cluster domain.	cl19102	73.1037	2.24E-16	235 - 292	specific	257783
HCP_like superfamily		The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (...	-	73.1037	2.24E-16	235 - 292	superfamily	267455

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_7660	PHATRDRAFT_7660	169179	313527	59988	Cre07.g320350.t1.2	AT2G42750.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 GO:0005506 -

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