32510 PLN02741
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32510 chr_2 PLN02741 853183 854358 - PLN02741

Synonyms

NCBI ID Ensembl Genomes exon ID
7450236 Thaps32510.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0064

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

bd1645

(bd1645) tpt
0.8988

bd1161

(bd1161) NA
0.8985

bd298

(bd298) ABM superfamily
0.8844

bd1306

(bd1306) NA
0.8795

bd760

(bd760) ZnMc superfamily
0.866

bd208

(bd208) DUF3529
0.8521

bd1893

(bd1893) NA
0.8517

bd718

(bd718) PRK10387
0.8491

bd1403

(bd1403) NA
0.8466

bd1380

(bd1380) ycf39
0.8404

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Lum_binding superfamily Lumazine binding domain; This domain binds to derivatives of lumazine in some proteins. Some... - 71.8628 9.31E-16 172 - 262 superfamily 250049
PLN02741 riboflavin synthase - 318.521 4.65E-108 59 - 270 multi-dom 178342

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38165 PHATRDRAFT_38165 152647 216313 430591 Cre06.g296600.t1.2 AT2G20690.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004746 GO:0009349 -

GO:0004746

riboflavin synthase activity

Details: 
Catalysis of the reaction: 2 6,7-dimethyl-8-(1-D-ribityl)lumazine + H(+) = 5-amino-6-(D-ribitylamino)uracil + riboflavin.
GO Category: 
MF

GO:0009349

riboflavin synthase complex

Details: 
An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.
GO Category: 
CC

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