32706 VRG4
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32706 chr_3 VRG4 498807 499629 - VRG4

Synonyms

NCBI ID Ensembl Genomes exon ID
7441779 Thaps32706.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0087

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0176
 0.34

Most Highly Correlated Transcripts

bd846

(bd846) NA
0.9428

8387

DUF1900
0.9246

bd1081

(bd1081) NA
0.9221

bd760

(bd760) ZnMc superfamily
0.919

bd1306

(bd1306) NA
0.9152

bd1214

(bd1214) KISc_C_terminal
0.9071

bd1645

(bd1645) tpt
0.9063

bd843

(bd843) NA
0.906

36373

DUF1295 superfamily
0.9047

22301

(PMM1) PLN02423
0.9036

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational... - 126.541 3.51E-34 3 - 263 multi-dom 227402

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9609 PHATRDRAFT_9609 173717 204026 Not available Cre12.g490100.t1.2 AT1G07290.1 560249

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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