33724 PLN02856
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33724 chr_4 PLN02856 1548525 1550858 + PLN02856

Synonyms

NCBI ID Ensembl Genomes exon ID
7446157 Thaps33724.2, Thaps33724.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0404

Most Highly Correlated Transcripts

bd1842

(bd1842) NA
0.9638

7299

hypothetical protein
0.9158

21655

hypothetical protein
0.911

2240

hypothetical protein
0.9035

263051

ZntA
0.9034

23952

hypothetical protein
0.9018

262120

ABC_ATPase superfamily
0.9018

261430

Aa_trans superfamily
0.8998

261357

NAD_binding_8 superfamily
0.8957

23904

hypothetical protein
0.8955

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GST_C_family superfamily C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase... - 130.779 2.08E-35 610 - 733 superfamily 261442
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 107.271 1.07E-27 522 - 595 superfamily 260398
FAA_hydrolase Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA)... cl11421 100.848 6.15E-24 172 - 432 specific 250705
FAA_hydrolase superfamily Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA)... - 100.848 6.15E-24 172 - 432 superfamily 264359
FAA_hydrolase_N superfamily Fumarylacetoacetase N-terminal; The N-terminal domain of fumarylacetoacetate hydrolase is... - 89.1649 5.99E-21 32 - 166 superfamily 255272
FAA_hydrolase_N superfamily Fumarylacetoacetase N-terminal; The N-terminal domain of fumarylacetoacetate hydrolase is... - 89.1649 5.99E-21 32 - 166 superfamily 255272
PLN02856 fumarylacetoacetase - 742.279 0 12 - 497 multi-dom 215461
maiA maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and... - 225.666 1.81E-68 522 - 739 multi-dom 233333

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50281 PHATRDRAFT_50281 Not available Not available 213655 Cre17.g732802.t1.1 AT1G12050.1 355326

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0003824 GO:0008152 GO:0004334 GO:0009072 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0004334

fumarylacetoacetase activity

Details: 
Catalysis of the reaction: 4-fumarylacetoacetate + H(2)O = acetoacetate + fumarate + H(+).
GO Category: 
MF

GO:0009072

aromatic amino acid family metabolic process

Details: 
The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO Category: 
BP

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