3422 DUF2237 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3422	chr_3	DUF2237 superfamily	920771	921272	-	DUF2237 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444771	Thaps3422.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0123

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0025	0.38	0.0000000018 0.000000059

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9918	37934 GRX_PICOT_like 0.8676	38707 Aldolase_Class_I superfamily 0.849	270309 hypothetical protein 0.8049	10752 hypothetical protein 0.8009	31751 PKCI_related 0.7937
268343 NA 0.7923	11793 DUF389 0.7912	36641 Aldolase_Class_I superfamily 0.7876	41655 Chloroa_b-bind 0.7826

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF2237 superfamily		Uncharacterized protein conserved in bacteria (DUF2237); This domain, found in various hypothetical...	-	57.8965	1.12E-11	24 - 64	superfamily	242521

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	153818	147975	435726	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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