34295 COPIIcoated_ERV
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34295 chr_5 COPIIcoated_ERV 607318 608574 + COPIIcoated_ERV

Synonyms

NCBI ID Ensembl Genomes exon ID
7451781 Thaps34295.2, Thaps34295.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0147

Most Highly Correlated Transcripts

3261

hypothetical protein
0.9181

2463

hypothetical protein
0.9138

30701

PRK05279
0.9091

25068

hypothetical protein
0.9079

plastid_psb28

0.9062

7611

hypothetical protein
0.9055

9115

DnaJ
0.9045

1215

E1_enzyme_family superfamily
0.9042

29237

(TUB4) PLN00222
0.9022

4603

COPIIcoated_ERV superfamily
0.9014

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COPIIcoated_ERV superfamily Endoplasmic reticulum vesicle transporter; This family is conserved from plants and fungi to humans... - 208.308 1.04E-64 145 - 380 superfamily 254553
COPIIcoated_ERV superfamily Endoplasmic reticulum vesicle transporter; This family is conserved from plants and fungi to humans... - 208.308 1.04E-64 145 - 380 superfamily 254553
ERGIC_N superfamily Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of... - 64.0499 7.94E-13 9 - 98 superfamily 258122

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23950 PHATRDRAFT_9509 PHATRDRAFT_9509 269061 228355 Not available Cre13.g579850.t1.2 AT1G36050.2 319656

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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