36572 MviM
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36572 chr_11a MviM 270843 272104 - MviM

Synonyms

NCBI ID Ensembl Genomes exon ID
7448291 Thaps36572.3, Thaps36572.4, Thaps36572.1, Thaps36572.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0247
 0.36

Most Highly Correlated Transcripts

261431

ABC_ATPase superfamily
0.8696

268443

SAICAR_synt_Sc
0.8589

36007

Aldolase_II superfamily
0.8565

6028

NA
0.8487

19158

GRX_PICOT_like
0.8355

35136

NA
0.8323

5105

hypothetical protein
0.8319

35049

PRK07411
0.8301

7886

hypothetical protein
0.8291

23740

DUF72
0.8289

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GFO_IDH_MocA Oxidoreductase family, NAD-binding Rossmann fold; This family of enzymes utilize NADP or NAD. This... cl19130 95.7377 2.15E-24 2 - 121 specific 250596
GFO_IDH_MocA superfamily Oxidoreductase family, NAD-binding Rossmann fold; This family of enzymes utilize NADP or NAD. This... - 95.7377 2.15E-24 2 - 121 superfamily 267483
MviM Predicted dehydrogenases and related proteins [General function prediction only] - 179.286 7.21E-53 1 - 337 multi-dom 223745

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21712 PHATRDRAFT_25422 PHATRDRAFT_25422 168694 317559 435339 Not available Not available 496155

KEGG

KEGG description KEGG Pathway
Pentose and glucuronate interconversions map00040

GO Terms

GO:0006118 GO:0008152 GO:0016491 GO:0047115 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0047115

trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity

Details: 
Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol.
GO Category: 
MF

Add comment

Log in to post comments