36634 Flavodoxin_1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36634 chr_11a Flavodoxin_1 209622 211664 + Flavodoxin_1

Synonyms

NCBI ID Ensembl Genomes exon ID
7444543 Thaps36634.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0315

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0076
 0.36

Most Highly Correlated Transcripts

264072

(HSF43) HSF_DNA-bind superfamily
0.9234

262152

hypothetical protein
0.9171

22666

hypothetical protein
0.9145

264318

(Tp_CCHH25) regulator [Rayko]
0.9133

2954

hypothetical protein
0.9132

264576

lysozyme_like superfamily
0.9102

261495

Peptidase_M36
0.9096

12187

hypothetical protein
0.9088

31437

Peptidase_M16 superfamily
0.9046

5801

hypothetical protein
0.9037

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Flavodoxin_1 Flavodoxin; Flavodoxin. cl00438 109.398 9.79E-28 126 - 285 specific 249722
FMN_red superfamily NADPH-dependent FMN reductase; NADPH-dependent FMN reductase. - 109.398 9.79E-28 126 - 285 superfamily 260423
FAD_binding_1 superfamily FAD binding domain; This domain is found in sulfite reductase, NADPH cytochrome P450 reductase,... - 101.239 4.45E-24 490 - 663 superfamily 250041

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8433 PHATRDRAFT_7755 PHATRDRAFT_7755 Not available 182759 77921 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0010181 GO:0016491 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0010181

FMN binding

Details: 
Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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