3741 (ELO1) ELO
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3741 chr_3 (ELO1) ELO 1698731 1699691 + ELO

Synonyms

NCBI ID Ensembl Genomes exon ID
7451336 Thaps3741.1, Thaps3741.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0156
 0.33

Most Highly Correlated Transcripts

bd672

(bd672) NA
0.9414

bd218

(bd218) Chloroa_b-bind superfamily
0.9314

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9126

bd1766

(bd1766) NA
0.9075

bd258

(bd258) HU
0.9007

bd1820

(bd1820) Fasciclin
0.8943

bd1765

(bd1765) NA
0.8928

1326

sopT
0.8895

bd1645

(bd1645) tpt
0.881

bd466

(bd466) cytochrome_b_C
0.8763

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ELO GNS1/SUR4 family; Members of this family are involved in long chain fatty acid elongation systems... cl03120 192.111 7.68E-60 32 - 271 specific 250402
ELO superfamily GNS1/SUR4 family; Members of this family are involved in long chain fatty acid elongation systems... - 192.111 7.68E-60 32 - 271 superfamily 261595

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_20508 PHATRDRAFT_20508 177742 260695 Not available Not available AT3G06470.1 352093

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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