37564 DIM1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37564 chr_14 DIM1 726049 726477 + DIM1

Synonyms

NCBI ID Ensembl Genomes exon ID
7441803 Thaps37564.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0431

Most Highly Correlated Transcripts

33353

TRX_family
0.9113

264533

(Tp_bZIP13) basic leucine zipper protein smilarity, DNA binding, transcription factor
0.9071

3261

hypothetical protein
0.9019

29237

(TUB4) PLN00222
0.8992

4898

hypothetical protein
0.8947

3715

hypothetical protein
0.8936

2463

hypothetical protein
0.8933

1137

hypothetical protein
0.8893

31778

Sybindin superfamily
0.8883

37118

FeThRed_B
0.884

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-... cl00388 208.688 5.44E-70 10 - 123 specific 239252
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 208.688 5.44E-70 10 - 123 superfamily 260398

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_18599 PHATR_18599 198681 212083 77810 Cre01.g055416.t1.1 AT5G08290.1 324774

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

GO:0005681 GO:0007067 GO:0005489 GO:0006118 -

GO:0005681

spliceosomal complex

Details: 
Any of a series of ribonucleoprotein complexes that contain RNA and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the splicing of a messenger RNA primary transcript to excise an intron.
GO Category: 
CC

GO:0007067

mitosis

Details: 
A cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell.
GO Category: 
BP

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

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