37683 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
37683	chr_15	ANK	327187	328812	+	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451881	Thaps37683.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0045

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0032	0.47	3.5 20000

Most Highly Correlated Transcripts

4108 hypothetical protein 0.7217	5920 NA 0.6977	4051 hypothetical protein 0.6861	24525 hypothetical protein 0.6784	29139 Glycos_transf_1 superfamily 0.6778	264598 AAA 0.6749
11196 hypothetical protein 0.668	37497 cysE 0.6659	16295 FBPase 0.6648	5317 hypothetical protein 0.6644

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	119.411	4.97E-32	196 - 325	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	119.411	4.97E-32	196 - 325	superfamily	238125
Ank_2		Ankyrin repeats (3 copies); Ankyrin repeats (3 copies).	-	63.8143	1.64E-12	186 - 269	multi-dom	257303
Ank_2		Ankyrin repeats (3 copies); Ankyrin repeats (3 copies).	-	63.8143	1.64E-12	186 - 269	multi-dom	257303

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments