38139 Chloroa_b-bindThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
38139	chr_18	Chloroa_b-bind	757939	758763	-	Chloroa_b-bind

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps38139.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0035

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0036	0.41

Most Highly Correlated Transcripts

25433 (Lhcr5) fucoxanthin chlorophyll a/c light-harvesting protein 0.9997	11563 hypothetical protein 0.9005	4745 hypothetical protein 0.8946	2540 hypothetical protein 0.8942	262229 (ECR1) NADB_Rossmann superfamily 0.8815	2996 hypothetical protein 0.8788
2318 Bromodomain 0.8779	30701 PRK05279 0.875	6997 hypothetical protein 0.8733	10718 hypothetical protein 0.872

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chloroa_b-bind		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	cl02879	84.2805	2.62E-20	89 - 221	specific	249913
Chloroa_b-bind superfamily		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	-	84.2805	2.62E-20	89 - 221	superfamily	261492

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_14242	PHATRDRAFT_14242	195639	155308	451739	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0009765 GO:0016020 -

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