3966 PT_UbiA superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3966 chr_3 PT_UbiA superfamily 2246490 2247654 - PT_UbiA superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452736 Thaps3966.3, Thaps3966.2, Thaps3966.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0175
 0.42

Most Highly Correlated Transcripts

261400

NA
0.9142

5038

DUF179
0.9121

22677

hypothetical protein
0.9087

21168

hypothetical protein
0.9084

2944

hypothetical protein
0.9023

35956

SIR2 superfamily
0.9023

22280

Ntn_hydrolase superfamily
0.9017

26769

ERG4_ERG24 superfamily
0.9008

263536

P4Hc
0.8976

261394

Aldo_ket_red
0.8915

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PT_UbiA superfamily UbiA family of prenyltransferases (PTases); Many characterized members of the UbiA... - 67.5287 3.45E-13 91 - 343 superfamily 260365

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004659 GO:0016021 -

GO:0004659

prenyltransferase activity

Details: 
Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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