40206 UAAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
40206	chr_4	UAA	465850	467506	+	UAA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447452	Thaps40206.2, Thaps40206.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0087

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0176	0.34	4.4 140000

Most Highly Correlated Transcripts

263436 P4Hc 0.9169	4433 hypothetical protein 0.9126	11387 SEC14 0.8972	11585 CDC27 0.8958	36641 Aldolase_Class_I superfamily 0.8946	11455 EXS 0.8945
7251 hypothetical protein 0.8945	268206 hypothetical protein 0.8939	bd1863 (bd1863) NA 0.893	6133 UBCc 0.8908

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UAA		UAA transporter family; This family includes transporters with a specificity for UDP-N-...	-	146.211	6.92E-40	114 - 399	multi-dom	254807

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42638	PHATRDRAFT_42638	190146	317664	Not available	Not available	Not available	559940

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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