40580 Ras_like_GTPase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40580 chr_5 Ras_like_GTPase superfamily 127773 129022 + Ras_like_GTPase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447251 Thaps40580.1, Thaps40580.2, Thaps40580.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0076

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0047
 0.45

Most Highly Correlated Transcripts

21811

UBCc
0.9039

11848

hypothetical protein
0.8987

6173

hypothetical protein
0.8739

25025

PHear_NECAP
0.8727

plastid_psb28

0.8715

3570

PP2Cc
0.8696

22673

NA
0.8673

41655

Chloroa_b-bind
0.8653

8041

hypothetical protein
0.8646

262994

COG0637
0.8642

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 223.662 4.01E-74 11 - 190 superfamily 266525
COG1100 GTPase SAR1 and related small G proteins [General function prediction only] - 98.8795 1.56E-25 12 - 186 multi-dom 224025

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9927 PHATRDRAFT_9927 183197 307056 Not available Not available Not available 354380

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 GO:0007264 GO:0015031 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0007264

small GTPase mediated signal transduction

Details: 
Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO Category: 
BP

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

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