11823 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11823	chr_22	ANK	547758	549200	+	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442850	Thaps11823.3, Thaps11823.6, Thaps11823.2, Thaps11823.1, Thaps11823.5, Thaps11823.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0355

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0059	0.44	2600 41

Most Highly Correlated Transcripts

bd885 (bd885) NA 0.9118	bd884 (bd884) NA 0.9075	bd693 (bd693) HSF_DNA-bind superfamily 0.8835	bd1954 (bd1954) NA 0.8749	bd1841 (bd1841) CAP10 superfamily 0.8744	bd1890 (bd1890) NA 0.8524
bd694 (bd694) NA 0.8466	bd764 (bd764) NA 0.8272	bd415 (bd415) arom_aa_hydroxylase superfamily 0.8202	bd848 (bd848) NA 0.8179

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	59.3194	2.72E-11	143 - 275	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	59.3194	2.72E-11	143 - 275	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
35611		Not available	181604	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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