4267 COG0790Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4267	chr_4	COG0790	608579	609552	-	COG0790

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452614	Thaps4267.1, Thaps4267.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0366

Most Highly Correlated Transcripts

38011 PKc_like superfamily 0.9431	4108 hypothetical protein 0.9383	30701 PRK05279 0.9316	1175 hypothetical protein 0.9295	1684 Ion_trans_2 0.9284	262821 AAA 0.9257
261019 HECTc 0.9186	263361 CHD 0.9173	3570 PP2Cc 0.9157	41780 S_TKc 0.9126

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG0790		FOG: TPR repeat, SEL1 subfamily [General function prediction only]	-	61.5987	3.56E-11	106 - 222	multi-dom	223861

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	107642	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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