11902 RPA_2b-aaRSs_OBF_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11902 chr_22 RPA_2b-aaRSs_OBF_like superfamily 837806 841885 - RPA_2b-aaRSs_OBF_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448229 Thaps11902.1, Thaps11902.3, Thaps11902.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0449

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0113
 0.35

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.904

12836

EEP superfamily
0.8944

bd446

(bd446) HrpA
0.8853

9491

hypothetical protein
0.8725

bd1192

(bd1192) Acyl_ACP_Desat
0.87

11373

hypothetical protein
0.8584

23497

hypothetical protein
0.8583

8576

Ion_trans_2
0.8527

33454

Ac_CoA_lig_AcsA
0.8502

bd1091

(bd1091) NA
0.8466

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RPA_2b-aaRSs_OBF_like superfamily Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with... - 63.8334 1.37E-11 753 - 889 superfamily 263924

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_46939 PHATR_46939 236114 241828 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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