4807 SRPBCC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4807 chr_4 SRPBCC superfamily 1969565 1970753 - SRPBCC superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451349 Thaps4807.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0018

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0049
 0.45

Most Highly Correlated Transcripts

bd1823

(bd1823) SCP superfamily
0.8493

bd759

(bd759) NA
0.817

bd1890

(bd1890) NA
0.8018

3752

Abhydrolase_6
0.7768

bd1877

(bd1877) NA
0.7756

bd1692

(bd1692) NA
0.7647

22511

Delta9-FADS-like
0.7574

10453

hypothetical protein
0.754

bd1439

(bd1439) ycf35
0.7401

6361

PTZ00318
0.7386

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SRPBCC superfamily START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; SRPBCC domains... - 64.6669 1.62E-12 136 - 339 superfamily 265438

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

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