5038 DUF179Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5038	chr_5	DUF179	228993	230891	+	DUF179

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447273	Thaps5038.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0136	0.28	27 1100

Most Highly Correlated Transcripts

10856 hypothetical protein 0.944	35956 SIR2 superfamily 0.9435	21681 hypothetical protein 0.9326	261400 NA 0.9317	20664 hypothetical protein 0.9281	4502 hypothetical protein 0.9273
11187 hypothetical protein 0.9269	22677 hypothetical protein 0.9264	6693 hypothetical protein 0.9257	7469 hypothetical protein 0.9239

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF179		Uncharacterized ACR, COG1678; Uncharacterized ACR, COG1678.	cl00731	94.5345	2.27E-22	115 - 278	specific	251425
DUF179 superfamily		Uncharacterized ACR, COG1678; Uncharacterized ACR, COG1678.	-	94.5345	2.27E-22	115 - 278	superfamily	260593

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre03.g189700.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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