5089 Cluap1Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5089	chr_5	Cluap1	343237	344237	-	Cluap1

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449664	Thaps5089.1, Thaps5089.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0304

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0005	0.39	0.000011 0.6

Most Highly Correlated Transcripts

4108 hypothetical protein 0.978	263864 0.9043	263917 0.8233	bd938 (bd938) PBP2_NikA_DppA_OppA_like superfamily 0.723	36322 TrmA 0.6707	36650 hypothetical protein 0.6671
2047 hypothetical protein 0.6589	262616 (MYB22) 0.6506	4071 hypothetical protein 0.6479	bd835 (bd835) DUF4137 0.6458

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cluap1		Clusterin-associated protein-1; This protein is conserved from worms to humans. The protein of 413...	-	99.701	1.18E-24	22 - 174	multi-dom	255838

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre17.g721250.t1.2	Not available	344952

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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