5470 CBS_pair superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5470	chr_5	CBS_pair superfamily	1302942	1304129	-	CBS_pair superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450087	Thaps5470.2, Thaps5470.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0101

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0077	0.37	0.000000001 0.32

Most Highly Correlated Transcripts

26991 GRX_GRXh_1_2_like 0.9124	35956 SIR2 superfamily 0.8954	261400 NA 0.8891	21255 SYLF 0.8882	36649 SufE superfamily 0.8819	7655 hypothetical protein 0.8818
20405 GRX_GRXh_1_2_like 0.881	9776 hypothetical protein 0.8808	31169 PRX_BCP 0.8769	4456 Abhydrolase_6 0.8753

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CBS_pair superfamily		The CBS domain, named after human CBS, is a small domain originally identified in cystathionine...	-	99.6631	1.58E-25	238 - 363	superfamily	265675

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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