5832 Cyt_b561_CYB561D2_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5832 chr_5 Cyt_b561_CYB561D2_like 2259547 2260659 - Cyt_b561_CYB561D2_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7447219 Thaps5832.3, Thaps5832.2, Thaps5832.1, Thaps5832.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0102

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0182
 0.48

Most Highly Correlated Transcripts

bd1380

(bd1380) ycf39
0.9291

bd208

(bd208) DUF3529
0.9254

5584

P4Hc
0.9138

bd1645

(bd1645) tpt
0.9079

262671

hypothetical protein
0.9065

5026

F1-ATPase_gamma
0.9056

16295

FBPase
0.9052

bd1306

(bd1306) NA
0.9033

270222

0.8854

20285

COG0694
0.8845

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product; Cytochrome b(561), as found in... cl14616 122.398 1.09E-34 16 - 196 specific 176491
Cyt_b561 superfamily Eukaryotic cytochrome b(561); Cytochrome b(561) is a family of endosomal or secretory vesicle-... - 122.398 1.09E-34 16 - 196 superfamily 265434

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_46816 PHATR_46816 207869 70490 206407 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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