6290 (NDK2) NDPk_I
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6290 chr_6 (NDK2) NDPk_I 1202147 1203108 + NDPk_I

Synonyms

NCBI ID Ensembl Genomes exon ID
7445999 Thaps6290.2, Thaps6290.3, Thaps6290.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0014

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0201
 0.23

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9495

bd208

(bd208) DUF3529
0.9437

bd718

(bd718) PRK10387
0.9409

bd1403

(bd1403) NA
0.9258

bd211

(bd211) Maf_Ham1 superfamily
0.9224

bd1645

(bd1645) tpt
0.9184

bd1380

(bd1380) ycf39
0.9159

bd1342

(bd1342) psaL
0.9126

23291

hypothetical protein
0.9079

bd1820

(bd1820) Fasciclin
0.8997

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NDPk_I Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large... cl00335 253.16 1.31E-86 38 - 167 specific 239876
NDPk superfamily Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of... - 253.16 1.31E-86 38 - 167 superfamily 260363
NDK Nucleoside diphosphate kinase; Nucleoside diphosphate kinase. - 240.838 1.23E-81 38 - 172 multi-dom 249778

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41676 PHATRDRAFT_41676 267891 211286 76228 Cre16.g650550.t2.1 AT5G63310.1 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004550 GO:0005524 GO:0006183 GO:0006228 GO:0006241 -

GO:0004550

nucleoside diphosphate kinase activity

Details: 
Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006183

GTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.
GO Category: 
BP

GO:0006228

UTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.
GO Category: 
BP

GO:0006241

CTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.
GO Category: 
BP

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