PITA_107 megaCluster: 11 Residual: 0.16

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_107 11 0.16 15 0 0.956356 0
Displaying 1 - 29 of 29
105446 guanosine monophosphate reductase 2

Details for - - guanosine monophosphate reductase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 105446

Tuberculist Genomic Region

110446 acetyl-Coenzyme A acetyltransferase 1

Details for - - acetyl-Coenzyme A acetyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110446

Tuberculist Genomic Region

11792 apurinic/apyrimidinic endonuclease 1

Details for - - apurinic/apyrimidinic endonuclease 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11792

Tuberculist Genomic Region

15199 heme binding protein 1

Details for - - heme binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15199

Tuberculist Genomic Region

18597 pyruvate dehydrogenase E1 alpha 1

Details for RP23-36P16.4 - pyruvate dehydrogenase E1 alpha 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18597

Tuberculist Genomic Region

18634 peroxisomal biogenesis factor 7

Details for - - peroxisomal biogenesis factor 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18634

Tuberculist Genomic Region

20280 sterol carrier protein 2, liver

Details for RP23-84A23.1 - sterol carrier protein 2, liver

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20280

Tuberculist Genomic Region

28040 DNA segment, Chr 6, Wayne State University 163, expressed

Details for - - DNA segment, Chr 6, Wayne State University 163, expressed

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28040

Tuberculist Genomic Region

56046 ubiquinol-cytochrome c reductase complex assembly factor 1

Details for RP23-380B10.2 - ubiquinol-cytochrome c reductase complex assembly factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56046

Tuberculist Genomic Region

56372 RIKEN cDNA 1110004F10 gene

Details for - - RIKEN cDNA 1110004F10 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56372

Tuberculist Genomic Region

66799 ubiquitin-conjugating enzyme E2W (putative)

Details for - - ubiquitin-conjugating enzyme E2W (putative)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66799

Tuberculist Genomic Region

66975 trafficking protein particle complex 13

Details for - - trafficking protein particle complex 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66975

Tuberculist Genomic Region

67201 glyoxalase domain containing 4

Details for RP23-147P4.6 - glyoxalase domain containing 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67201

Tuberculist Genomic Region

68021 biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)

Details for - - biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68021

Tuberculist Genomic Region

68153 general transcription factor II E, polypeptide 2 (beta subunit)

Details for - - general transcription factor II E, polypeptide 2 (beta subunit)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68153

Tuberculist Genomic Region

71340 RIO kinase 1 (yeast)

Details for - - RIO kinase 1 (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71340

Tuberculist Genomic Region

101513 MOB kinase activator 2

Details for - - MOB kinase activator 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 101513

Tuberculist Genomic Region

11757 peroxiredoxin 3

Details for - - peroxiredoxin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11757

Tuberculist Genomic Region

15388 heterogeneous nuclear ribonucleoprotein L

Details for - - heterogeneous nuclear ribonucleoprotein L

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15388

Tuberculist Genomic Region

26371 cytosolic iron-sulfur protein assembly 1

Details for RP23-206D14.3 - cytosolic iron-sulfur protein assembly 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26371

Tuberculist Genomic Region

27061 B cell receptor associated protein 31

Details for RP23-329M9.5 - B cell receptor associated protein 31

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27061

Tuberculist Genomic Region

57423 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2

Details for - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57423

Tuberculist Genomic Region

66046 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5

Details for - - NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66046

Tuberculist Genomic Region

66258 mitochondrial ribosomal protein S17

Details for - - mitochondrial ribosomal protein S17

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66258

Tuberculist Genomic Region

66925 succinate dehydrogenase complex, subunit D, integral membrane protein

Details for UNQ5809 - succinate dehydrogenase complex, subunit D, integral membrane protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66925

Tuberculist Genomic Region

68347 RIKEN cDNA 0610011F06 gene

Details for - - RIKEN cDNA 0610011F06 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68347

Tuberculist Genomic Region

69151 leucine zipper and CTNNBIP1 domain containing

Details for RP23-153G17.1 - leucine zipper and CTNNBIP1 domain containing

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69151

Tuberculist Genomic Region

73694 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7

Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73694

Tuberculist Genomic Region

11532 alcohol dehydrogenase 5 (class III), chi polypeptide

Details for - - alcohol dehydrogenase 5 (class III), chi polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11532

Tuberculist Genomic Region

TFs percTargets pValue
NA
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000000015 ARAAAARMAA NA 1300 TTAAAAACAWA NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.51 CGGCGT NA 1.68 CGCGTCAC NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.5 ACNTCSTA NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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