PITA_110 megaCluster: 6 Residual: 0.17

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_110 6 0.17 15 0 0.948721 0
Displaying 1 - 37 of 37
17001 leukotriene C4 synthase

Details for RP23-319B15.7 - leukotriene C4 synthase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17001

Tuberculist Genomic Region

53945 solute carrier family 40 (iron-regulated transporter), member 1

Details for - - solute carrier family 40 (iron-regulated transporter), member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53945

Tuberculist Genomic Region

59013 heterogeneous nuclear ribonucleoprotein H1

Details for RP23-121P11.1 - heterogeneous nuclear ribonucleoprotein H1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 59013

Tuberculist Genomic Region

59052 methyltransferase like 9

Details for MNCb-5680 - methyltransferase like 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 59052

Tuberculist Genomic Region

66694 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1

Details for - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66694

Tuberculist Genomic Region

67075 magnesium transporter 1

Details for RP23-186F4.1 - magnesium transporter 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67075

Tuberculist Genomic Region

101488 solute carrier organic anion transporter family, member 2b1

Details for - - solute carrier organic anion transporter family, member 2b1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 101488

Tuberculist Genomic Region

107652 UDP-N-acetylglucosamine pyrophosphorylase 1

Details for - - UDP-N-acetylglucosamine pyrophosphorylase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107652

Tuberculist Genomic Region

114641 ribosomal protein L31

Details for - - ribosomal protein L31

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 114641

Tuberculist Genomic Region

12469 chaperonin containing Tcp1, subunit 8 (theta)

Details for - - chaperonin containing Tcp1, subunit 8 (theta)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12469

Tuberculist Genomic Region

14423 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1

Details for - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14423

Tuberculist Genomic Region

14635 galactokinase 1

Details for RP23-42F6.2 - galactokinase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14635

Tuberculist Genomic Region

17181 matrilin 2

Details for - - matrilin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17181

Tuberculist Genomic Region

18453 prolyl 4-hydroxylase, beta polypeptide

Details for RP23-84C12.2 - prolyl 4-hydroxylase, beta polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18453

Tuberculist Genomic Region

20422 split hand/foot malformation (ectrodactyly) type 1

Details for - - split hand/foot malformation (ectrodactyly) type 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20422

Tuberculist Genomic Region

20916 succinate-Coenzyme A ligase, ADP-forming, beta subunit

Details for - - succinate-Coenzyme A ligase, ADP-forming, beta subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20916

Tuberculist Genomic Region

227929 cytohesin 1 interacting protein

Details for RP23-255J22.4 - cytohesin 1 interacting protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227929

Tuberculist Genomic Region

232679 zinc finger, C3HC type 1

Details for - - zinc finger, C3HC type 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 232679

Tuberculist Genomic Region

380629 headcase homolog (Drosophila)

Details for - - headcase homolog (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 380629

Tuberculist Genomic Region

56358 coatomer protein complex, subunit zeta 2

Details for RP23-353J21.4 - coatomer protein complex, subunit zeta 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56358

Tuberculist Genomic Region

63959 solute carrier family 29 (nucleoside transporters), member 1

Details for - - solute carrier family 29 (nucleoside transporters), member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 63959

Tuberculist Genomic Region

64209 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

Details for - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64209

Tuberculist Genomic Region

66413 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6

Details for - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66413

Tuberculist Genomic Region

66469 family with sequence similarity 213, member B

Details for RP23-15L19.6 - family with sequence similarity 213, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66469

Tuberculist Genomic Region

68263 pyruvate dehydrogenase (lipoamide) beta

Details for - - pyruvate dehydrogenase (lipoamide) beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68263

Tuberculist Genomic Region

72391 cyclin-dependent kinase inhibitor 3

Details for - - cyclin-dependent kinase inhibitor 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72391

Tuberculist Genomic Region

74197 general transcription factor II E, polypeptide 1 (alpha subunit)

Details for - - general transcription factor II E, polypeptide 1 (alpha subunit)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74197

Tuberculist Genomic Region

76915 meiotic nuclear divisions 1 homolog (S. cerevisiae)

Details for - - meiotic nuclear divisions 1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76915

Tuberculist Genomic Region

76936 heterogeneous nuclear ribonucleoprotein M

Details for RP24-225N8.1 - heterogeneous nuclear ribonucleoprotein M

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76936

Tuberculist Genomic Region

80286 tumor suppressor candidate 3

Details for - - tumor suppressor candidate 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80286

Tuberculist Genomic Region

230908 TAR DNA binding protein

Details for RP23-331P21.5 - TAR DNA binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230908

Tuberculist Genomic Region

108000 centromere protein F

Details for - - centromere protein F

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108000

Tuberculist Genomic Region

17992 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4

Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17992

Tuberculist Genomic Region

66231 THO complex 7 homolog (Drosophila)

Details for - - THO complex 7 homolog (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66231

Tuberculist Genomic Region

66861 DnaJ (Hsp40) homolog, subfamily C, member 10

Details for RP23-282M14.2 - DnaJ (Hsp40) homolog, subfamily C, member 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66861

Tuberculist Genomic Region

213742 inactive X specific transcripts

Details for - - inactive X specific transcripts

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 213742

Tuberculist Genomic Region

70536 glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70536

Tuberculist Genomic Region

TFs percTargets pValue
V_MSX1_01_M00394 0.111111 0.00000384
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.24 TCGGCG NA 1.34 CGCGNAGG NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.51 AGTCGT NA NA 0.58 GTCNTTGA mmu-mir-196a-1-3p 7mer_m8

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
Log in or register to post comments