PITA_123 megaCluster: 8 Residual: 0.13

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_123 8 0.13 15 0 0.967398 0
Displaying 1 - 23 of 23
100929 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)

Details for - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100929

Tuberculist Genomic Region

106326 oxysterol binding protein-like 11

Details for - - oxysterol binding protein-like 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 106326

Tuberculist Genomic Region

12576 cyclin-dependent kinase inhibitor 1B

Details for - - cyclin-dependent kinase inhibitor 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12576

Tuberculist Genomic Region

17850 methylmalonyl-Coenzyme A mutase

Details for - - methylmalonyl-Coenzyme A mutase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17850

Tuberculist Genomic Region

19687 replication factor C (activator 1) 1

Details for - - replication factor C (activator 1) 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19687

Tuberculist Genomic Region

20817 serine/arginine-rich protein specific kinase 2

Details for - - serine/arginine-rich protein specific kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20817

Tuberculist Genomic Region

226539 aspartyl-tRNA synthetase 2 (mitochondrial)

Details for - - aspartyl-tRNA synthetase 2 (mitochondrial)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226539

Tuberculist Genomic Region

231670 F-box protein 21

Details for - - F-box protein 21

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231670

Tuberculist Genomic Region

64291 oxysterol binding protein-like 1A

Details for - - oxysterol binding protein-like 1A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64291

Tuberculist Genomic Region

68964 CTS telomere maintenance complex component 1

Details for RP23-19I2.2 - CTS telomere maintenance complex component 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68964

Tuberculist Genomic Region

74114 carnitine O-octanoyltransferase

Details for - - carnitine O-octanoyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74114

Tuberculist Genomic Region

75415 Rho GTPase activating protein 12

Details for - - Rho GTPase activating protein 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75415

Tuberculist Genomic Region

76608 HECT domain containing 3

Details for RP23-419D6.4 - HECT domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76608

Tuberculist Genomic Region

84505 SET domain, bifurcated 1

Details for - - SET domain, bifurcated 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 84505

Tuberculist Genomic Region

100900 HscB iron-sulfur cluster co-chaperone homolog (E. coli)

Details for - - HscB iron-sulfur cluster co-chaperone homolog (E. coli)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100900

Tuberculist Genomic Region

140742 sestrin 1

Details for - - sestrin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 140742

Tuberculist Genomic Region

170719 oxidation resistance 1

Details for - - oxidation resistance 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170719

Tuberculist Genomic Region

18640 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2

Details for - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18640

Tuberculist Genomic Region

18747 protein kinase, cAMP dependent, catalytic, alpha

Details for - - protein kinase, cAMP dependent, catalytic, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18747

Tuberculist Genomic Region

208194 endo/exonuclease (5'-3'), endonuclease G-like

Details for - - endo/exonuclease (5'-3'), endonuclease G-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208194

Tuberculist Genomic Region

217473 ankyrin repeat and MYND domain containing 2

Details for - - ankyrin repeat and MYND domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217473

Tuberculist Genomic Region

270076 glutaryl-Coenzyme A dehydrogenase

Details for - - glutaryl-Coenzyme A dehydrogenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 270076

Tuberculist Genomic Region

79221 histone deacetylase 9

Details for - - histone deacetylase 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 79221

Tuberculist Genomic Region

TFs percTargets pValue
GSC2_homeodomain_DBD_monomeric_10_1 0.217391 0.0000366
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.00035 WTWAAAAAYAA NA 10 WTTAAAAWGWTW NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.31 CGCCGY NA 1.35 NCGCGCGN
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.55 AATCGT NA NA 0.62 ACGTTYGG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
mmu-miR-431 0.45 0.0000396
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