PITA_142 megaCluster: 2 Residual: 0.21

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_142 2 0.21 15 0 0.907337 0
Displaying 1 - 26 of 26
100040233 predicted gene 10334

Details for - - predicted gene 10334

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100040233

Tuberculist Genomic Region

17874 hyaluronan synthase1

Details for - - hyaluronan synthase1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15116

Tuberculist Genomic Region

20779 myeloid differentiation primary response gene 88

Details for - - myeloid differentiation primary response gene 88

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17874

Tuberculist Genomic Region

22165 Rous sarcoma oncogene

Details for RP23-169M4.1 - Rous sarcoma oncogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20779

Tuberculist Genomic Region

226517 TXK tyrosine kinase

Details for - - TXK tyrosine kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22165

Tuberculist Genomic Region

231130 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

Details for - - Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226517

Tuberculist Genomic Region

246728 TNFAIP3 interacting protein 2

Details for - - TNFAIP3 interacting protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231130

Tuberculist Genomic Region

668139 2'-5' oligoadenylate synthetase 2

Details for - - 2'-5' oligoadenylate synthetase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 246728

Tuberculist Genomic Region

69721 predicted gene 8995

Details for - - predicted gene 8995

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 668139

Tuberculist Genomic Region

100040462 NFKB inhibitor interacting Ras-like protein 1

Details for RP23-205G15.2 - NFKB inhibitor interacting Ras-like protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69721

Tuberculist Genomic Region

100198 myeloid nuclear differentiation antigen like

Details for - - myeloid nuclear differentiation antigen like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100040462

Tuberculist Genomic Region

100503498 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)

Details for RP23-169H13.3 - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100198

Tuberculist Genomic Region

14676 predicted gene, 16675

Details for - - predicted gene, 16675

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503498

Tuberculist Genomic Region

15958 guanine nucleotide binding protein, alpha 15

Details for - - guanine nucleotide binding protein, alpha 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14676

Tuberculist Genomic Region

16197 interferon-induced protein with tetratricopeptide repeats 2

Details for - - interferon-induced protein with tetratricopeptide repeats 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15958

Tuberculist Genomic Region

17357 interleukin 7 receptor

Details for - - interleukin 7 receptor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16197

Tuberculist Genomic Region

18187 MARCKS-like 1

Details for RP23-209C6.6 - MARCKS-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17357

Tuberculist Genomic Region

22146 neuropilin 2

Details for RP23-149A5.1 - neuropilin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18187

Tuberculist Genomic Region

22323 tubulin, alpha 1C

Details for - - tubulin, alpha 1C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22146

Tuberculist Genomic Region

240327 vasodilator-stimulated phosphoprotein

Details for - - vasodilator-stimulated phosphoprotein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22323

Tuberculist Genomic Region

56066 predicted gene 4951

Details for - - predicted gene 4951

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240327

Tuberculist Genomic Region

56501 chemokine (C-X-C motif) ligand 11

Details for - - chemokine (C-X-C motif) ligand 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56066

Tuberculist Genomic Region

60440 E74-like factor 4 (ets domain transcription factor)

Details for RP23-260P5.2 - E74-like factor 4 (ets domain transcription factor)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56501

Tuberculist Genomic Region

627049 interferon inducible GTPase 1

Details for - - interferon inducible GTPase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60440

Tuberculist Genomic Region

83490 zinc finger protein 800

Details for - - zinc finger protein 800

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 627049

Tuberculist Genomic Region

Details for - - phosphoinositide-3-kinase adaptor protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83490

Tuberculist Genomic Region

TFs percTargets pValue
V_R_01_M00273 0.695652 0.000013
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.0081 TNTCTCTTYCY 0.0016 NGAGGAAGNAG NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.82 CCGCGT NA 0.97 TGAGGCGC NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.73 CAACATCC NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
mmu-miR-144 0.5 0.0000634
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