PITA_152 megaCluster: 3 Residual: 0.24

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_152 3 0.24 15 0 0.88411 0
Displaying 1 - 35 of 35
15162 hemopoietic cell kinase

Details for - - hemopoietic cell kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15162

Tuberculist Genomic Region

21416 transcription factor 7 like 2, T cell specific, HMG box

Details for - - transcription factor 7 like 2, T cell specific, HMG box

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21416

Tuberculist Genomic Region

23960 2'-5' oligoadenylate synthetase 1G

Details for - - 2'-5' oligoadenylate synthetase 1G

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23960

Tuberculist Genomic Region

270084 lysophosphatidylcholine acyltransferase 2

Details for - - lysophosphatidylcholine acyltransferase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 270084

Tuberculist Genomic Region

72027 solute carrier family 39 (zinc transporter), member 4

Details for - - solute carrier family 39 (zinc transporter), member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72027

Tuberculist Genomic Region

100038548 predicted gene 10521

Details for - - predicted gene 10521

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100038548

Tuberculist Genomic Region

100503626 predicted gene, 19803

Details for - - predicted gene, 19803

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503626

Tuberculist Genomic Region

13051 predicted gene, 19955

Details for - - predicted gene, 19955

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503907

Tuberculist Genomic Region

14130 chemokine (C-X3-C motif) receptor 1

Details for - - chemokine (C-X3-C motif) receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13051

Tuberculist Genomic Region

170758 Fc receptor, IgG, low affinity IIb

Details for - - Fc receptor, IgG, low affinity IIb

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14130

Tuberculist Genomic Region

17096 RAS-related C3 botulinum substrate 3

Details for RP23-84C12.18-001 - RAS-related C3 botulinum substrate 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170758

Tuberculist Genomic Region

17390 Yamaguchi sarcoma viral (v-yes-1) oncogene homolog

Details for RP23-49A12.2 - Yamaguchi sarcoma viral (v-yes-1) oncogene homolog

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17096

Tuberculist Genomic Region

17395 matrix metallopeptidase 2

Details for - - matrix metallopeptidase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17390

Tuberculist Genomic Region

19252 matrix metallopeptidase 9

Details for RP23-61O3.10-001 - matrix metallopeptidase 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17395

Tuberculist Genomic Region

195522 dual specificity phosphatase 1

Details for - - dual specificity phosphatase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19252

Tuberculist Genomic Region

19697 zinc finger protein 691

Details for RP23-344D2.5 - zinc finger protein 691

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 195522

Tuberculist Genomic Region

216080 v-rel reticuloendotheliosis viral oncogene homolog A (avian)

Details for - - v-rel reticuloendotheliosis viral oncogene homolog A (avian)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19697

Tuberculist Genomic Region

21934 ubiquitin-conjugating enzyme E2D 1

Details for - - ubiquitin-conjugating enzyme E2D 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216080

Tuberculist Genomic Region

22436 tumor necrosis factor receptor superfamily, member 11a

Details for - - tumor necrosis factor receptor superfamily, member 11a

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21934

Tuberculist Genomic Region

240921 xanthine dehydrogenase

Details for - - xanthine dehydrogenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22436

Tuberculist Genomic Region

24110 predicted gene 4955

Details for - - predicted gene 4955

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240921

Tuberculist Genomic Region

26360 ubiquitin specific peptidase 18

Details for - - ubiquitin specific peptidase 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 24110

Tuberculist Genomic Region

328830 angiopoietin-like 2

Details for RP23-35J6.3 - angiopoietin-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26360

Tuberculist Genomic Region

56209 RIKEN cDNA A530064D06 gene

Details for - - RIKEN cDNA A530064D06 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 328830

Tuberculist Genomic Region

64381 glycerophosphodiester phosphodiesterase 1

Details for - - glycerophosphodiester phosphodiesterase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56209

Tuberculist Genomic Region

67399 membrane-spanning 4-domains, subfamily A, member 8A

Details for - - membrane-spanning 4-domains, subfamily A, member 8A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64381

Tuberculist Genomic Region

68742 PDZ and LIM domain 7

Details for RP23-211O9.2 - PDZ and LIM domain 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67399

Tuberculist Genomic Region

74440 transmembrane protein 219

Details for - - transmembrane protein 219

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68742

Tuberculist Genomic Region

14726 c-Maf inducing protein

Details for - - c-Maf inducing protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74440

Tuberculist Genomic Region

209200 podoplanin

Details for RP23-348F1.2 - podoplanin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14726

Tuberculist Genomic Region

231655 deltex 3-like (Drosophila)

Details for - - deltex 3-like (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209200

Tuberculist Genomic Region

57444 2'-5' oligoadenylate synthetase-like 1

Details for - - 2'-5' oligoadenylate synthetase-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231655

Tuberculist Genomic Region

216991 interferon-stimulated protein

Details for - - interferon-stimulated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57444

Tuberculist Genomic Region

18036 ArfGAP with dual PH domains 2

Details for RP23-7J19.2 - ArfGAP with dual PH domains 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216991

Tuberculist Genomic Region

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18036

Tuberculist Genomic Region

TFs percTargets pValue
V_IRF_Q6_01_M00972 0.419355 0.00000118
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.97 TCGGGG Zfp740.2, Zbtb7b.1 1.05 CGGGCACT NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.55 CCCNAC NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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