PITA_167 megaCluster: 11 Residual: 0.16 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_167	11	0.16	14	0	0.918975	0

Members

Displaying 1 - 16 of 16

109212 family with sequence similarity 64, member A Details for RP23-207N15.1 - family with sequence similarity 64, member A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 109212 Tuberculist Genomic Region	17992 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17992 Tuberculist Genomic Region
213742 inactive X specific transcripts Details for - - inactive X specific transcripts GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 213742 Tuberculist Genomic Region	219114 spindle and kinetochore associated complex subunit 3 Details for - - spindle and kinetochore associated complex subunit 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 219114 Tuberculist Genomic Region
53381 peroxiredoxin 4 Details for RP23-395K13.3 - peroxiredoxin 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 53381 Tuberculist Genomic Region	68832 RIKEN cDNA 1110057K04 gene Details for - - RIKEN cDNA 1110057K04 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68832 Tuberculist Genomic Region
70415 RIKEN cDNA 2610018G03 gene Details for RP23-245F8.1 - RIKEN cDNA 2610018G03 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70415 Tuberculist Genomic Region	70536 glutaminyl-peptide cyclotransferase (glutaminyl cyclase) Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70536 Tuberculist Genomic Region
20409 glutamine fructose-6-phosphate transaminase 1 Details for - - glutamine fructose-6-phosphate transaminase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14583 Tuberculist Genomic Region	208628 osteoclast stimulating factor 1 Details for - - osteoclast stimulating factor 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20409 Tuberculist Genomic Region
66231 kinetochore associated 1 Details for - - kinetochore associated 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 208628 Tuberculist Genomic Region	66355 THO complex 7 homolog (Drosophila) Details for - - THO complex 7 homolog (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66231 Tuberculist Genomic Region
67121 guanosine monophosphate reductase Details for - - guanosine monophosphate reductase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66355 Tuberculist Genomic Region	68603 microtubule associated serine/threonine kinase-like Details for - - microtubule associated serine/threonine kinase-like GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67121 Tuberculist Genomic Region
70218 phosphomevalonate kinase Details for - - phosphomevalonate kinase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68603 Tuberculist Genomic Region	Details for RP23-463E7.6 - kinesin family member 18B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70218 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
NA

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
7700	AAAAANAAAAA	NA	50000	CCGCCCCCSCC	SP1_MA0079.2, Klf4_MA0039.2, V$SP1SP3_Q4_M01219, V$EGR1_Q6_M01873, V$WT1_Q6_01_M02036, V$ETF_Q6_M00695, V$ZFP281_01_M01597, V$MAZR_01_M00491, V$ZFP281_04_M02831, V$ZNF219_01_M01122, V$UF1H3BETA_Q6_M01068, V$SP1_03_M02281, V$CACD_01_M01113, V$KROX_Q6_M00982, V$EGR1_06_M02744, V$SP1_Q2_01_M00933, V$ZBP89_Q4_M01816, V$SP4_Q5_M01273, V$SP1_02_M01303, V$SP1_Q6_M00196, V$GKLF_02_M01588, V$ZFP740_03_M02834, V$MAZ_Q6_01_M02023, V$SP1_Q6_01_M00931, V$WT1_Q6_M01118, V$EGR_Q6_M00807, V$KLF7_03_M02773, V$SP1_Q4_01_M00932, Zfp281.2, Egr1.1, Zfp740.1, Klf7.1, Sp4.1, Bcl6b.2, Smad3.1, Zfp410.1

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.54	CGCGGT	NA	1.76	CGATGCGG	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
1.09	TTCTACAG	NA	NA		NA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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