PITA_212 megaCluster: 2 Residual: 0.18

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_212 2 0.18 9 0 0.731404 0.283
Displaying 1 - 48 of 48
246727 2'-5' oligoadenylate synthetase 3

Details for - - 2'-5' oligoadenylate synthetase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 246727

Tuberculist Genomic Region

100503912 predicted gene 11772

Details for - - predicted gene 11772

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503912

Tuberculist Genomic Region

109082 F-box and WD-40 domain protein 17

Details for - - F-box and WD-40 domain protein 17

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109082

Tuberculist Genomic Region

112419 RIKEN cDNA 2010002M12 gene

Details for - - RIKEN cDNA 2010002M12 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 112419

Tuberculist Genomic Region

11432 acid phosphatase 2, lysosomal

Details for RP23-20F9.7 - acid phosphatase 2, lysosomal

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11432

Tuberculist Genomic Region

11982 ATPase, class V, type 10A

Details for - - ATPase, class V, type 10A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11982

Tuberculist Genomic Region

12257 translocator protein

Details for - - translocator protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12257

Tuberculist Genomic Region

12862 cytochrome c oxidase subunit VIa polypeptide 2

Details for - - cytochrome c oxidase subunit VIa polypeptide 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12862

Tuberculist Genomic Region

12894 carnitine palmitoyltransferase 1a, liver

Details for - - carnitine palmitoyltransferase 1a, liver

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12894

Tuberculist Genomic Region

12982 colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)

Details for - - colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12982

Tuberculist Genomic Region

13003 versican

Details for - - versican

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13003

Tuberculist Genomic Region

14659 glutamine repeat protein 1

Details for - - glutamine repeat protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14659

Tuberculist Genomic Region

14664 solute carrier family 6 (neurotransmitter transporter, glycine), member 9

Details for RP23-133J9.1 - solute carrier family 6 (neurotransmitter transporter, glycine), member 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14664

Tuberculist Genomic Region

15042 histocompatibility 2, T region locus 24

Details for - - histocompatibility 2, T region locus 24

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15042

Tuberculist Genomic Region

15186 histidine decarboxylase

Details for RP23-251E2.2 - histidine decarboxylase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15186

Tuberculist Genomic Region

15559 5-hydroxytryptamine (serotonin) receptor 2B

Details for - - 5-hydroxytryptamine (serotonin) receptor 2B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15559

Tuberculist Genomic Region

16913 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)

Details for - - proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16913

Tuberculist Genomic Region

170755 serum/glucocorticoid regulated kinase 3

Details for - - serum/glucocorticoid regulated kinase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170755

Tuberculist Genomic Region

17769 5,10-methylenetetrahydrofolate reductase

Details for RP23-139J21.2 - 5,10-methylenetetrahydrofolate reductase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17769

Tuberculist Genomic Region

19222 prostaglandin I receptor (IP)

Details for - - prostaglandin I receptor (IP)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19222

Tuberculist Genomic Region

19419 RAS guanyl releasing protein 1

Details for RP23-73I19.3 - RAS guanyl releasing protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19419

Tuberculist Genomic Region

20401 SH3-domain binding protein 1

Details for AL592169.1 - SH3-domain binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20401

Tuberculist Genomic Region

20558 schlafen 4

Details for RP23-308N3.2 - schlafen 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20558

Tuberculist Genomic Region

20910 syntaxin binding protein 1

Details for RP23-17P12.13-002 - syntaxin binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20910

Tuberculist Genomic Region

21354 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)

Details for - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21354

Tuberculist Genomic Region

219131 PHD finger protein 11A

Details for - - PHD finger protein 11A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 219131

Tuberculist Genomic Region

227671 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

Details for RP23-430H1.5 - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227671

Tuberculist Genomic Region

235315 ring finger protein 214

Details for - - ring finger protein 214

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235315

Tuberculist Genomic Region

235330 tetratricopeptide repeat domain 12

Details for - - tetratricopeptide repeat domain 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235330

Tuberculist Genomic Region

243197 major facilitator superfamily domain containing 7A

Details for - - major facilitator superfamily domain containing 7A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 243197

Tuberculist Genomic Region

26433 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

Details for - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26433

Tuberculist Genomic Region

269346 solute carrier family 28 (sodium-coupled nucleoside transporter), member 2

Details for RP23-173H17.7 - solute carrier family 28 (sodium-coupled nucleoside transporter), member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269346

Tuberculist Genomic Region

319916 RIKEN cDNA A730011C13 gene

Details for - - RIKEN cDNA A730011C13 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319916

Tuberculist Genomic Region

54123 interferon regulatory factor 7

Details for - - interferon regulatory factor 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54123

Tuberculist Genomic Region

60361 membrane-spanning 4-domains, subfamily A, member 4B

Details for - - membrane-spanning 4-domains, subfamily A, member 4B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60361

Tuberculist Genomic Region

622459 predicted gene 12216

Details for RP23-303F24.3 - predicted gene 12216

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 622459

Tuberculist Genomic Region

67446 dual specificity phosphatase 28

Details for - - dual specificity phosphatase 28

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67446

Tuberculist Genomic Region

69217 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4

Details for - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69217

Tuberculist Genomic Region

69368 WD repeat and FYVE domain containing 1

Details for - - WD repeat and FYVE domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69368

Tuberculist Genomic Region

70785 DENN/MADD domain containing 1C

Details for - - DENN/MADD domain containing 1C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70785

Tuberculist Genomic Region

71684 RNA binding motif protein 43

Details for RP23-332K7.2 - RNA binding motif protein 43

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71684

Tuberculist Genomic Region

71733 sushi domain containing 2

Details for - - sushi domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71733

Tuberculist Genomic Region

72244 RIKEN cDNA 1600014C10 gene

Details for - - RIKEN cDNA 1600014C10 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72244

Tuberculist Genomic Region

74735 tripartite motif-containing 14

Details for RP23-117B19.5 - tripartite motif-containing 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74735

Tuberculist Genomic Region

76624 RIKEN cDNA 1700099I09 gene

Details for - - RIKEN cDNA 1700099I09 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76624

Tuberculist Genomic Region

80287 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3

Details for - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80287

Tuberculist Genomic Region

83382 sialic acid binding Ig-like lectin E

Details for - - sialic acid binding Ig-like lectin E

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83382

Tuberculist Genomic Region

50721 sirtuin 6

Details for - - sirtuin 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 50721

Tuberculist Genomic Region

TFs percTargets pValue
Isgf3g.1 0.272727 0.000000000889
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.69 CGGGGT NA 0.87 TCGCCCCA Bcl6b.2, Zfp410.1
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.43 CGCCCG NA NA 0.44 CCYGCTCN NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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