PITA_217 megaCluster: 9 Residual: 0.20

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_217 9 0.20 15 0 0.935039 0
Displaying 1 - 39 of 39
13478 dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)

Details for - - dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13478

Tuberculist Genomic Region

107271 tyrosyl-tRNA synthetase

Details for - - tyrosyl-tRNA synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107271

Tuberculist Genomic Region

108062 cleavage stimulation factor, 3' pre-RNA subunit 2

Details for RP23-182N4.2 - cleavage stimulation factor, 3' pre-RNA subunit 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108062

Tuberculist Genomic Region

108156 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase

Details for - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108156

Tuberculist Genomic Region

109689 arrestin, beta 1

Details for - - arrestin, beta 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109689

Tuberculist Genomic Region

110750 chromosome segregation 1-like (S. cerevisiae)

Details for RP23-19L12.9 - chromosome segregation 1-like (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110750

Tuberculist Genomic Region

12567 cyclin-dependent kinase 4

Details for - - cyclin-dependent kinase 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12567

Tuberculist Genomic Region

14251 flotillin 1

Details for - - flotillin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14251

Tuberculist Genomic Region

18974 polymerase (DNA directed), epsilon 2 (p59 subunit)

Details for - - polymerase (DNA directed), epsilon 2 (p59 subunit)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18974

Tuberculist Genomic Region

19076 DNA primase, p58 subunit

Details for - - DNA primase, p58 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19076

Tuberculist Genomic Region

19714 REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)

Details for - - REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19714

Tuberculist Genomic Region

207965 valosin containing protein lysine (K) methyltransferase

Details for - - valosin containing protein lysine (K) methyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 207965

Tuberculist Genomic Region

211389 sulfite oxidase

Details for - - sulfite oxidase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 211389

Tuberculist Genomic Region

218639 ADP-ribosylation factor-like 15

Details for - - ADP-ribosylation factor-like 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 218639

Tuberculist Genomic Region

226432 importin 9

Details for - - importin 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226432

Tuberculist Genomic Region

229473 RIKEN cDNA D930015E06 gene

Details for - - RIKEN cDNA D930015E06 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 229473

Tuberculist Genomic Region

232853 zinc finger protein 954

Details for - - zinc finger protein 954

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 232853

Tuberculist Genomic Region

234797 RIKEN cDNA 6430548M08 gene

Details for - - RIKEN cDNA 6430548M08 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234797

Tuberculist Genomic Region

240168 RAS, guanyl releasing protein 3

Details for - - RAS, guanyl releasing protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240168

Tuberculist Genomic Region

319845 Bardet-Biedl syndrome 9 (human)

Details for - - Bardet-Biedl syndrome 9 (human)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319845

Tuberculist Genomic Region

320088 RIKEN cDNA C030034L19 gene

Details for - - RIKEN cDNA C030034L19 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320088

Tuberculist Genomic Region

320528 vacuolar protein sorting 13C (yeast)

Details for - - vacuolar protein sorting 13C (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320528

Tuberculist Genomic Region

330361 GC-rich sequence DNA binding factor 2

Details for - - GC-rich sequence DNA binding factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 330361

Tuberculist Genomic Region

52665 enoyl Coenzyme A hydratase domain containing 1

Details for - - enoyl Coenzyme A hydratase domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52665

Tuberculist Genomic Region

66179 2-oxoglutarate and iron-dependent oxygenase domain containing 3

Details for RP23-349B15.2 - 2-oxoglutarate and iron-dependent oxygenase domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66179

Tuberculist Genomic Region

66881 prenylcysteine oxidase 1

Details for - - prenylcysteine oxidase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66881

Tuberculist Genomic Region

67054 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase

Details for - - phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67054

Tuberculist Genomic Region

67429 NudC domain containing 1

Details for - - NudC domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67429

Tuberculist Genomic Region

68023 peptide deformylase (mitochondrial)

Details for - - peptide deformylase (mitochondrial)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68023

Tuberculist Genomic Region

68845 PIH1 domain containing 1

Details for - - PIH1 domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68845

Tuberculist Genomic Region

73341 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6

Details for RP23-372E6.1 - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73341

Tuberculist Genomic Region

75146 transmembrane protein 180

Details for - - transmembrane protein 180

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75146

Tuberculist Genomic Region

77065 integrator complex subunit 7

Details for - - integrator complex subunit 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77065

Tuberculist Genomic Region

77744 bora, aurora kinase A activator

Details for - - bora, aurora kinase A activator

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77744

Tuberculist Genomic Region

97487 CKLF-like MARVEL transmembrane domain containing 4

Details for - - CKLF-like MARVEL transmembrane domain containing 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 97487

Tuberculist Genomic Region

98732 RAB3 GTPase activating protein subunit 2

Details for - - RAB3 GTPase activating protein subunit 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 98732

Tuberculist Genomic Region

20148 dehydrogenase/reductase (SDR family) member 3

Details for RP23-133N19.1 - dehydrogenase/reductase (SDR family) member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20148

Tuberculist Genomic Region

216190 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2

Details for - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216190

Tuberculist Genomic Region

333433 glycerol-3-phosphate dehydrogenase 1-like

Details for - - glycerol-3-phosphate dehydrogenase 1-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 333433

Tuberculist Genomic Region

TFs percTargets pValue
HMX1_homeodomain_DBD_monomeric_11_1 0.157895 0.0000049
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.35 ACCGCG NA 1.36 CGCCAKCG NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.51 TCGTAG NA NA 0.66 TCTAANNC NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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