PITA_81 megaCluster: 2 Residual: 0.31

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_81 2 0.31 14 0 0.801995 0

Members

Displaying 1 - 71 of 71
100019 midasin homolog (yeast)

Details for - - midasin homolog (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100019

Tuberculist Genomic Region

100217414 small Cajal body-specific RNA 3A

Details for - - small Cajal body-specific RNA 3A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100217414

Tuberculist Genomic Region

104099 integrin alpha 9

Details for - - integrin alpha 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104099

Tuberculist Genomic Region

13025 cytotoxic T lymphocyte-associated protein 2 beta

Details for - - cytotoxic T lymphocyte-associated protein 2 beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13025

Tuberculist Genomic Region

13614 endothelin 1

Details for - - endothelin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13614

Tuberculist Genomic Region

14676 guanine nucleotide binding protein, alpha 15

Details for - - guanine nucleotide binding protein, alpha 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14676

Tuberculist Genomic Region

212531 SH3 domain binding glutamic acid-rich protein like 2

Details for - - SH3 domain binding glutamic acid-rich protein like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 212531

Tuberculist Genomic Region

21897 toll-like receptor 1

Details for - - toll-like receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21897

Tuberculist Genomic Region

258304 olfactory receptor 498

Details for - - olfactory receptor 498

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258304

Tuberculist Genomic Region

258331 olfactory receptor 1330

Details for RP23-149E24.6 - olfactory receptor 1330

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258331

Tuberculist Genomic Region

28126 NOP16 nucleolar protein

Details for - - NOP16 nucleolar protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28126

Tuberculist Genomic Region

319454 regulatory associated protein of MTOR, complex 1, opposite strand

Details for - - regulatory associated protein of MTOR, complex 1, opposite strand

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319454

Tuberculist Genomic Region

319955 excision repair cross-complementing rodent repair deficiency, complementation group 6

Details for - - excision repair cross-complementing rodent repair deficiency, complementation group 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319955

Tuberculist Genomic Region

320247 RIKEN cDNA C030023E24 gene

Details for - - RIKEN cDNA C030023E24 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320247

Tuberculist Genomic Region

329540 RIKEN cDNA 8430427H17 gene

Details for RP23-204D17.2 - RIKEN cDNA 8430427H17 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 329540

Tuberculist Genomic Region

331476 predicted gene 5125

Details for - - predicted gene 5125

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 331476

Tuberculist Genomic Region

378472 vault RNA component 5

Details for - - vault RNA component 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 378472

Tuberculist Genomic Region

381417 predicted gene 14085

Details for RP23-357I14.1 - predicted gene 14085

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381417

Tuberculist Genomic Region

382000 cDNA sequence AY761184

Details for - - cDNA sequence AY761184

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 382000

Tuberculist Genomic Region

58217 triggering receptor expressed on myeloid cells 1

Details for - - triggering receptor expressed on myeloid cells 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58217

Tuberculist Genomic Region

619308 RIKEN cDNA F830208F22 gene

Details for - - RIKEN cDNA F830208F22 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 619308

Tuberculist Genomic Region

67224 mediator complex subunit 29

Details for - - mediator complex subunit 29

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67224

Tuberculist Genomic Region

70859 leucine rich repeat containing 63

Details for - - leucine rich repeat containing 63

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70859

Tuberculist Genomic Region

71306 microfibrillar-associated protein 3-like

Details for - - microfibrillar-associated protein 3-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71306

Tuberculist Genomic Region

80796 calmodulin 4

Details for - - calmodulin 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80796

Tuberculist Genomic Region

20351 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A

Details for - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20351

Tuberculist Genomic Region

20557 schlafen 3

Details for RP23-381B19.1 - schlafen 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20557

Tuberculist Genomic Region

320189 RIKEN cDNA 9430076C15 gene

Details for - - RIKEN cDNA 9430076C15 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320189

Tuberculist Genomic Region

387230 microRNA 99b

Details for - - microRNA 99b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387230

Tuberculist Genomic Region

71701 polyribonucleotide nucleotidyltransferase 1

Details for RP23-313I4.2 - polyribonucleotide nucleotidyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71701

Tuberculist Genomic Region

98402 SH3-domain binding protein 4

Details for - - SH3-domain binding protein 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 98402

Tuberculist Genomic Region

100504215 predicted gene, 20115

Details for - - predicted gene, 20115

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504215

Tuberculist Genomic Region

11847 arginase type II

Details for - - arginase type II

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11847

Tuberculist Genomic Region

13518 dystonin

Details for - - dystonin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13518

Tuberculist Genomic Region

14825 chemokine (C-X-C motif) ligand 1

Details for - - chemokine (C-X-C motif) ligand 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14825

Tuberculist Genomic Region

15558 5-hydroxytryptamine (serotonin) receptor 2A

Details for - - 5-hydroxytryptamine (serotonin) receptor 2A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15558

Tuberculist Genomic Region

16180 interleukin 1 receptor accessory protein

Details for - - interleukin 1 receptor accessory protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16180

Tuberculist Genomic Region

16363 interferon regulatory factor 2

Details for - - interferon regulatory factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16363

Tuberculist Genomic Region

17857 myxovirus (influenza virus) resistance 1

Details for - - myxovirus (influenza virus) resistance 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17857

Tuberculist Genomic Region

17874 myeloid differentiation primary response gene 88

Details for - - myeloid differentiation primary response gene 88

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17874

Tuberculist Genomic Region

18037 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18037

Tuberculist Genomic Region

18187 neuropilin 2

Details for RP23-149A5.1 - neuropilin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18187

Tuberculist Genomic Region

19124 protein C receptor, endothelial

Details for RP23-388H13.2 - protein C receptor, endothelial

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19124

Tuberculist Genomic Region

192656 receptor (TNFRSF)-interacting serine-threonine kinase 2

Details for RP23-378L22.1 - receptor (TNFRSF)-interacting serine-threonine kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 192656

Tuberculist Genomic Region

19734 regulator of G-protein signaling 16

Details for - - regulator of G-protein signaling 16

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19734

Tuberculist Genomic Region

20218 KH domain containing, RNA binding, signal transduction associated 1

Details for RP23-151A15.11-002 - KH domain containing, RNA binding, signal transduction associated 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20218

Tuberculist Genomic Region

216850 KDM1 lysine (K)-specific demethylase 6B

Details for RP23-5O23.5 - KDM1 lysine (K)-specific demethylase 6B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216850

Tuberculist Genomic Region

219140 spermatogenesis associated 13

Details for - - spermatogenesis associated 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 219140

Tuberculist Genomic Region

22035 tumor necrosis factor (ligand) superfamily, member 10

Details for - - tumor necrosis factor (ligand) superfamily, member 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22035

Tuberculist Genomic Region

22146 tubulin, alpha 1C

Details for - - tubulin, alpha 1C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22146

Tuberculist Genomic Region

22695 zinc finger protein 36

Details for - - zinc finger protein 36

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22695

Tuberculist Genomic Region

245536 predicted gene 614

Details for RP23-440J15.1 - predicted gene 614

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 245536

Tuberculist Genomic Region

326623 tumor necrosis factor (ligand) superfamily, member 15

Details for - - tumor necrosis factor (ligand) superfamily, member 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 326623

Tuberculist Genomic Region

327766 transmembrane protein 26

Details for - - transmembrane protein 26

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 327766

Tuberculist Genomic Region

383619 absent in melanoma 2

Details for - - absent in melanoma 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 383619

Tuberculist Genomic Region

57783 TNFAIP3 interacting protein 1

Details for - - TNFAIP3 interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57783

Tuberculist Genomic Region

74481 basic leucine zipper transcription factor, ATF-like 2

Details for - - basic leucine zipper transcription factor, ATF-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74481

Tuberculist Genomic Region

75646 retinoic acid induced 14

Details for - - retinoic acid induced 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75646

Tuberculist Genomic Region

76650 sulfiredoxin 1 homolog (S. cerevisiae)

Details for - - sulfiredoxin 1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76650

Tuberculist Genomic Region

780818 immunoglobulin heavy variable V11-2

Details for - - immunoglobulin heavy variable V11-2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 780818

Tuberculist Genomic Region

80885 niacin receptor 1

Details for - - niacin receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80885

Tuberculist Genomic Region

107607 nucleotide-binding oligomerization domain containing 1

Details for - - nucleotide-binding oligomerization domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107607

Tuberculist Genomic Region

230738 zinc finger CCCH type containing 12A

Details for RP23-325M14.9 - zinc finger CCCH type containing 12A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230738

Tuberculist Genomic Region

23921 SH2B adaptor protein 2

Details for - - SH2B adaptor protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23921

Tuberculist Genomic Region

380916 leucine-rich repeats and calponin homology (CH) domain containing 1

Details for - - leucine-rich repeats and calponin homology (CH) domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 380916

Tuberculist Genomic Region

381287 RIKEN cDNA A530032D15Rik gene

Details for - - RIKEN cDNA A530032D15Rik gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381287

Tuberculist Genomic Region

56066 chemokine (C-X-C motif) ligand 11

Details for - - chemokine (C-X-C motif) ligand 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56066

Tuberculist Genomic Region

74646 splA/ryanodine receptor domain and SOCS box containing 1

Details for RP23-169H13.1 - splA/ryanodine receptor domain and SOCS box containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74646

Tuberculist Genomic Region

230779 serine incorporator 2

Details for RP23-12J1.7 - serine incorporator 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230779

Tuberculist Genomic Region

54199 chemokine (C-C motif) receptor-like 2

Details for - - chemokine (C-C motif) receptor-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54199

Tuberculist Genomic Region

14745 lysophosphatidic acid receptor 1

Details for RP23-170A3.2 - lysophosphatidic acid receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14745

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_NFKB_Q6_M00194 0.413793 0.000000162

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.0000000000000033 ACTTTTTTTTTA NA 0.096 TTTTTRAANAAT NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.77 ATCGCG NA 0.74 CGGCGANA NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.41 CNNCAAAG NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-3104-5p 0.304348 0.0000186

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