TargetScan_102 megaCluster: 2 Residual: 0.17

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_102 2 0.17 12 0 0.828059 0
Displaying 1 - 25 of 25
100502793 predicted gene, 19375

Details for - - predicted gene, 19375

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100502793

Tuberculist Genomic Region

14701 colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)

Details for - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12983

Tuberculist Genomic Region

15258 guanine nucleotide binding protein (G protein), gamma 12

Details for - - guanine nucleotide binding protein (G protein), gamma 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14701

Tuberculist Genomic Region

17948 homeodomain interacting protein kinase 2

Details for - - homeodomain interacting protein kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15258

Tuberculist Genomic Region

21938 NLR family, apoptosis inhibitory protein 2

Details for RP23-333E24.2 - NLR family, apoptosis inhibitory protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17948

Tuberculist Genomic Region

724064 tumor necrosis factor receptor superfamily, member 1b

Details for RP23-157J11.1 - tumor necrosis factor receptor superfamily, member 1b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21938

Tuberculist Genomic Region

74704 microRNA 148b

Details for - - microRNA 148b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 724064

Tuberculist Genomic Region

100042498 RIKEN cDNA 4930518I15 gene

Details for - - RIKEN cDNA 4930518I15 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74704

Tuberculist Genomic Region

12484 Mir22 host gene (non-protein coding)

Details for - - Mir22 host gene (non-protein coding)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100042498

Tuberculist Genomic Region

12984 CD24a antigen

Details for - - CD24a antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12484

Tuberculist Genomic Region

17112 colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)

Details for - - colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12984

Tuberculist Genomic Region

18187 transmembrane 4 superfamily member 1

Details for - - transmembrane 4 superfamily member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17112

Tuberculist Genomic Region

233033 neuropilin 2

Details for RP23-149A5.1 - neuropilin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18187

Tuberculist Genomic Region

241075 sterile alpha motif domain containing 4B

Details for - - sterile alpha motif domain containing 4B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233033

Tuberculist Genomic Region

259122 pleckstrin homology domain containing, family M, member 3

Details for - - pleckstrin homology domain containing, family M, member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 241075

Tuberculist Genomic Region

30805 olfactory receptor 635

Details for - - olfactory receptor 635

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 259122

Tuberculist Genomic Region

320404 solute carrier family 22 (organic cation transporter), member 4

Details for RP23-354D12.1 - solute carrier family 22 (organic cation transporter), member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 30805

Tuberculist Genomic Region

338523 inositol 1,4,5-trisphosphate 3-kinase B

Details for - - inositol 1,4,5-trisphosphate 3-kinase B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320404

Tuberculist Genomic Region

56068 lysine (K)-specific demethylase 7A

Details for - - lysine (K)-specific demethylase 7A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 338523

Tuberculist Genomic Region

666907 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1

Details for RP23-340M18.4 - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56068

Tuberculist Genomic Region

68732 membrane-spanning 4-domains, subfamily A, member 4A

Details for - - membrane-spanning 4-domains, subfamily A, member 4A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 666907

Tuberculist Genomic Region

69581 leucine rich repeat containing 16A

Details for RP23-462P2.7 - leucine rich repeat containing 16A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68732

Tuberculist Genomic Region

76199 ras homolog gene family, member U

Details for - - ras homolog gene family, member U

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69581

Tuberculist Genomic Region

226517 mediator complex subunit 13-like

Details for - - mediator complex subunit 13-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76199

Tuberculist Genomic Region

Details for - - Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226517

Tuberculist Genomic Region

TFs percTargets pValue
V_TCF3_01_M01594 0.421053 0.00000956
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
79 AAANAAAGGAAA NA 650 AACCACCTCCYT NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.25 NCCGCG NA 1.53 GGNCGGCG NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.92 TAGACMNG NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-452 0.882353 0.00000111
miRNAs percTargets pValue
mmu-miR-188-3p 0.705882 0.000000249
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