TargetScan_108 megaCluster: 2 Residual: 0.31

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_108 2 0.31 15 0 0.829161 0
Displaying 1 - 53 of 53
100038411 predicted gene 15998

Details for - - predicted gene 15998

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100038411

Tuberculist Genomic Region

12257 translocator protein

Details for - - translocator protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12257

Tuberculist Genomic Region

12862 cytochrome c oxidase subunit VIa polypeptide 2

Details for - - cytochrome c oxidase subunit VIa polypeptide 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12862

Tuberculist Genomic Region

14190 fibrinogen-like protein 2

Details for - - fibrinogen-like protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14190

Tuberculist Genomic Region

14696 guanine nucleotide binding protein (G protein), beta 4

Details for - - guanine nucleotide binding protein (G protein), beta 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14696

Tuberculist Genomic Region

15186 histidine decarboxylase

Details for RP23-251E2.2 - histidine decarboxylase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15186

Tuberculist Genomic Region

18779 phospholipase A2 receptor 1

Details for - - phospholipase A2 receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18779

Tuberculist Genomic Region

18854 promyelocytic leukemia

Details for - - promyelocytic leukemia

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18854

Tuberculist Genomic Region

19122 prion protein

Details for RP23-401J24.1 - prion protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19122

Tuberculist Genomic Region

209588 secreted and transmembrane 1A

Details for RP23-400P17.4 - secreted and transmembrane 1A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209588

Tuberculist Genomic Region

210808 laccase (multicopper oxidoreductase) domain containing 1

Details for - - laccase (multicopper oxidoreductase) domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210808

Tuberculist Genomic Region

21355 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)

Details for RP23-123G8.1 - transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21355

Tuberculist Genomic Region

22033 TNF receptor-associated factor 5

Details for - - TNF receptor-associated factor 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22033

Tuberculist Genomic Region

228094 ceramide kinase-like

Details for RP23-335P15.2 - ceramide kinase-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228094

Tuberculist Genomic Region

244882 tumor necrosis factor, alpha-induced protein 8-like 3

Details for - - tumor necrosis factor, alpha-induced protein 8-like 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 244882

Tuberculist Genomic Region

246746 CD300 antigen like family member F

Details for RP23-342L24.3 - CD300 antigen like family member F

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 246746

Tuberculist Genomic Region

27356 insulin-like 6

Details for - - insulin-like 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27356

Tuberculist Genomic Region

52552 poly (ADP-ribose) polymerase family, member 8

Details for - - poly (ADP-ribose) polymerase family, member 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52552

Tuberculist Genomic Region

54721 tyrosine kinase 2

Details for - - tyrosine kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54721

Tuberculist Genomic Region

668212 EFR3 homolog B (S. cerevisiae)

Details for - - EFR3 homolog B (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 668212

Tuberculist Genomic Region

67092 glycine amidinotransferase (L-arginine:glycine amidinotransferase)

Details for RP23-101F14.1 - glycine amidinotransferase (L-arginine:glycine amidinotransferase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67092

Tuberculist Genomic Region

71801 pleckstrin homology domain containing, family F (with FYVE domain) member 2

Details for RP23-130H14.2 - pleckstrin homology domain containing, family F (with FYVE domain) member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71801

Tuberculist Genomic Region

71946 endonuclease domain containing 1

Details for - - endonuclease domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71946

Tuberculist Genomic Region

72535 aldehyde dehydrogenase 1 family, member B1

Details for RP23-358I3.2 - aldehyde dehydrogenase 1 family, member B1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72535

Tuberculist Genomic Region

73893 transmembrane protein 202

Details for - - transmembrane protein 202

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73893

Tuberculist Genomic Region

94212 phosphoprotein associated with glycosphingolipid microdomains 1

Details for - - phosphoprotein associated with glycosphingolipid microdomains 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 94212

Tuberculist Genomic Region

100038522 DNA methyltransferase 3A, opposite strand

Details for - - DNA methyltransferase 3A, opposite strand

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100038522

Tuberculist Genomic Region

100503912 predicted gene 11772

Details for - - predicted gene 11772

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503912

Tuberculist Genomic Region

112419 RIKEN cDNA 2010002M12 gene

Details for - - RIKEN cDNA 2010002M12 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 112419

Tuberculist Genomic Region

12894 carnitine palmitoyltransferase 1a, liver

Details for - - carnitine palmitoyltransferase 1a, liver

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12894

Tuberculist Genomic Region

15039 histocompatibility 2, T region locus 22

Details for - - histocompatibility 2, T region locus 22

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15039

Tuberculist Genomic Region

208846 dishevelled associated activator of morphogenesis 1

Details for - - dishevelled associated activator of morphogenesis 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208846

Tuberculist Genomic Region

21354 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)

Details for - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21354

Tuberculist Genomic Region

219131 PHD finger protein 11A

Details for - - PHD finger protein 11A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 219131

Tuberculist Genomic Region

21954 troponin I, cardiac 3

Details for - - troponin I, cardiac 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21954

Tuberculist Genomic Region

230787 thymocyte selection associated family member 2

Details for RP23-442A20.5 - thymocyte selection associated family member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230787

Tuberculist Genomic Region

237886 schlafen 9

Details for RP23-392I13.10-002 - schlafen 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237886

Tuberculist Genomic Region

258331 olfactory receptor 1330

Details for RP23-149E24.6 - olfactory receptor 1330

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258331

Tuberculist Genomic Region

269346 solute carrier family 28 (sodium-coupled nucleoside transporter), member 2

Details for RP23-173H17.7 - solute carrier family 28 (sodium-coupled nucleoside transporter), member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269346

Tuberculist Genomic Region

320463 RIKEN cDNA F630111L10 gene

Details for - - RIKEN cDNA F630111L10 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320463

Tuberculist Genomic Region

387228 microRNA 30d

Details for - - microRNA 30d

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387228

Tuberculist Genomic Region

67809 regulator of microtubule dynamics 3

Details for RP23-15I21.5 - regulator of microtubule dynamics 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67809

Tuberculist Genomic Region

69368 WD repeat and FYVE domain containing 1

Details for - - WD repeat and FYVE domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69368

Tuberculist Genomic Region

72244 RIKEN cDNA 1600014C10 gene

Details for - - RIKEN cDNA 1600014C10 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72244

Tuberculist Genomic Region

74152 RIKEN cDNA 1300002K09 gene

Details for RP23-358I3.4 - RIKEN cDNA 1300002K09 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74152

Tuberculist Genomic Region

74735 tripartite motif-containing 14

Details for RP23-117B19.5 - tripartite motif-containing 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74735

Tuberculist Genomic Region

80287 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3

Details for - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80287

Tuberculist Genomic Region

93842 immunoglobulin superfamily, member 9

Details for - - immunoglobulin superfamily, member 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 93842

Tuberculist Genomic Region

11982 ATPase, class V, type 10A

Details for - - ATPase, class V, type 10A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11982

Tuberculist Genomic Region

16891 lipase, endothelial

Details for - - lipase, endothelial

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16891

Tuberculist Genomic Region

17769 5,10-methylenetetrahydrofolate reductase

Details for RP23-139J21.2 - 5,10-methylenetetrahydrofolate reductase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17769

Tuberculist Genomic Region

19419 RAS guanyl releasing protein 1

Details for RP23-73I19.3 - RAS guanyl releasing protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19419

Tuberculist Genomic Region

22329 vascular cell adhesion molecule 1

Details for - - vascular cell adhesion molecule 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22329

Tuberculist Genomic Region

TFs percTargets pValue
IRF1_MA0050.1 0.404255 0.000000000399
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.83 CGCGGT NA 0.86 GGTGAGCG NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.45 CGCGCT NA NA 0.46 CATAGGCT NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
mmu-miR-340-3p 0.194444 0.0000283
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