TargetScan_12 megaCluster: 2 Residual: 0.20 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_12	2	0.20	9	0	0.532493	1

Members

Displaying 1 - 35 of 35

106338 RIKEN cDNA E230013L22 gene Details for - - RIKEN cDNA E230013L22 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 102132 Tuberculist Genomic Region	11936 phosphoinositide-3-kinase, regulatory subunit 6 Details for RP23-432M23.3 - phosphoinositide-3-kinase, regulatory subunit 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 104709 Tuberculist Genomic Region
12483 peptidylprolyl isomerase F (cyclophilin F) Details for - - peptidylprolyl isomerase F (cyclophilin F) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 105675 Tuberculist Genomic Region	12633 NOL1/NOP2/Sun domain family member 3 Details for - - NOL1/NOP2/Sun domain family member 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 106338 Tuberculist Genomic Region
14042 FXYD domain-containing ion transport regulator 2 Details for - - FXYD domain-containing ion transport regulator 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11936 Tuberculist Genomic Region	14051 CD22 antigen Details for - - CD22 antigen GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12483 Tuberculist Genomic Region
14362 CASP8 and FADD-like apoptosis regulator Details for - - CASP8 and FADD-like apoptosis regulator GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12633 Tuberculist Genomic Region	14744 exostoses (multiple) 1 Details for - - exostoses (multiple) 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14042 Tuberculist Genomic Region
16456 eyes absent 4 homolog (Drosophila) Details for - - eyes absent 4 homolog (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14051 Tuberculist Genomic Region	16468 frizzled homolog 1 (Drosophila) Details for - - frizzled homolog 1 (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14362 Tuberculist Genomic Region
170716 G-protein coupled receptor 65 Details for - - G-protein coupled receptor 65 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14744 Tuberculist Genomic Region	18128 F11 receptor Details for - - F11 receptor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16456 Tuberculist Genomic Region
19731 jumonji, AT rich interactive domain 2 Details for - - jumonji, AT rich interactive domain 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16468 Tuberculist Genomic Region	211550 cytochrome P450, family 4, subfamily f, polypeptide 13 Details for - - cytochrome P450, family 4, subfamily f, polypeptide 13 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 170716 Tuberculist Genomic Region
22341 notch 1 Details for RP23-306D20.12-001 - notch 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18128 Tuberculist Genomic Region	235330 ral guanine nucleotide dissociation stimulator,-like 1 Details for - - ral guanine nucleotide dissociation stimulator,-like 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19731 Tuberculist Genomic Region
244864 TRAF-interacting protein with forkhead-associated domain Details for - - TRAF-interacting protein with forkhead-associated domain GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 211550 Tuberculist Genomic Region	245944 vascular endothelial growth factor C Details for - - vascular endothelial growth factor C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22341 Tuberculist Genomic Region
258783 tetratricopeptide repeat domain 12 Details for - - tetratricopeptide repeat domain 12 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 235330 Tuberculist Genomic Region	269800 layilin Details for - - layilin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 244864 Tuberculist Genomic Region
27226 vacuolar protein sorting 54 (yeast) Details for RP23-154K13.1 - vacuolar protein sorting 54 (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 245944 Tuberculist Genomic Region	320910 olfactory receptor 920 Details for - - olfactory receptor 920 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 258783 Tuberculist Genomic Region
381524 zinc finger protein 384 Details for - - zinc finger protein 384 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 269800 Tuberculist Genomic Region	434219 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) Details for - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 27226 Tuberculist Genomic Region
52915 integrin beta 8 Details for - - integrin beta 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 320910 Tuberculist Genomic Region	632883 expressed sequence AI427809 Details for - - expressed sequence AI427809 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 381524 Tuberculist Genomic Region
68544 tripartite motif-containing 30C Details for - - tripartite motif-containing 30C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 434219 Tuberculist Genomic Region	70093 zinc finger, MIZ-type containing 2 Details for RP23-198N14.8 - zinc finger, MIZ-type containing 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 52915 Tuberculist Genomic Region
70240 predicted gene 14989 Details for - - predicted gene 14989 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 632883 Tuberculist Genomic Region	99543 RIKEN cDNA 2310036O22 gene Details for - - RIKEN cDNA 2310036O22 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68544 Tuberculist Genomic Region
227399 ubiquitin-conjugating enzyme E2Q (putative) 1 Details for - - ubiquitin-conjugating enzyme E2Q (putative) 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70093 Tuberculist Genomic Region	74243 UFM1-specific peptidase 1 Details for - - UFM1-specific peptidase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70240 Tuberculist Genomic Region
Details for DN-252N9.4 - olfactomedin-like 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 99543 Tuberculist Genomic Region	Details for - - diphosphoinositol pentakisphosphate kinase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 227399 Tuberculist Genomic Region
Details for RP23-173O12.2 - SLX4 interacting protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74243 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_MAZ_Q6_01_M02023	1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.028	AGAARSNRGNAA	V$PARP_Q4_M02027	15	YCCCCACCCCC	SP1_MA0079.2, Klf4_MA0039.2, V$ZFP281_01_M01597, V$UF1H3BETA_Q6_M01068, V$SP1_02_M01303, V$ZNF219_01_M01122, V$ZFP281_04_M02831, V$SP1_03_M02281, V$CACD_01_M01113, V$SP4_Q5_M01273, V$MAZR_01_M00491, V$CKROX_Q2_M01175, V$SP1_Q2_01_M00933, V$EKLF_Q5_M01874, V$MAZ_Q6_M00649, V$CACBINDINGPROTEIN_Q6_M00720, V$ZBP89_Q4_M01816, V$MAZ_Q6_01_M02023, V$SP1SP3_Q4_M01219, V$SP1_Q6_01_M00931, V$SP1_Q4_01_M00932, V$MZF1_01_M00083, V$SP1_Q6_M00196, V$KLF7_03_M02773, V$FKLF_Q5_M01837, V$ZFP740_03_M02834, V$GKLF_02_M01588, V$EGR2_Q6_M02092, V$MZF1_Q5_M01733, V$KROX_Q6_M00982, V$KLF15_Q2_M01714, V$MOVOB_01_M01104, Zfp281.2, Zfp740.1, Klf7.1, Sp4.1, Egr1.1, Bcl6b.2

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.01	GCGACC	NA	1.12	GAGCGGAC	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.55	GTAGCTGC	NA	NA		NA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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