TargetScan_126 megaCluster: 11 Residual: 0.18

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_126 11 0.18 15 0 0.94824 0

Members

Displaying 1 - 31 of 31
11757 peroxiredoxin 3

Details for - - peroxiredoxin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11757

Tuberculist Genomic Region

15388 heterogeneous nuclear ribonucleoprotein L

Details for - - heterogeneous nuclear ribonucleoprotein L

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15388

Tuberculist Genomic Region

15452 hypoxanthine guanine phosphoribosyl transferase

Details for RP23-173F3.3 - hypoxanthine guanine phosphoribosyl transferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15452

Tuberculist Genomic Region

217558 G2/M-phase specific E3 ubiquitin ligase

Details for - - G2/M-phase specific E3 ubiquitin ligase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217558

Tuberculist Genomic Region

225995 RIKEN cDNA D030056L22 gene

Details for - - RIKEN cDNA D030056L22 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 225995

Tuberculist Genomic Region

228033 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)

Details for RP23-146O7.1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228033

Tuberculist Genomic Region

237823 phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)

Details for RP23-153N12.1 - phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237823

Tuberculist Genomic Region

241490 RNA binding motif protein 45

Details for RP23-211L7.2 - RNA binding motif protein 45

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 241490

Tuberculist Genomic Region

66870 serpine1 mRNA binding protein 1

Details for - - serpine1 mRNA binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66870

Tuberculist Genomic Region

67203 nuclear distribution gene E homolog 1 (A nidulans)

Details for - - nuclear distribution gene E homolog 1 (A nidulans)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67203

Tuberculist Genomic Region

67493 methyltransferase like 16

Details for RP23-174M12.2 - methyltransferase like 16

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67493

Tuberculist Genomic Region

68520 zinc finger, FYVE domain containing 21

Details for - - zinc finger, FYVE domain containing 21

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68520

Tuberculist Genomic Region

69554 kelch domain containing 2

Details for - - kelch domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69554

Tuberculist Genomic Region

12663 choroideremia-like

Details for - - choroideremia-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12663

Tuberculist Genomic Region

13476 receptor accessory protein 5

Details for - - receptor accessory protein 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13476

Tuberculist Genomic Region

13682 eukaryotic translation initiation factor 4A2

Details for - - eukaryotic translation initiation factor 4A2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13682

Tuberculist Genomic Region

14590 gamma-glutamyl hydrolase

Details for RP23-259B18.3 - gamma-glutamyl hydrolase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14590

Tuberculist Genomic Region

15510 heat shock protein 1 (chaperonin)

Details for - - heat shock protein 1 (chaperonin)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15510

Tuberculist Genomic Region

19387 RAN GTPase activating protein 1

Details for - - RAN GTPase activating protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19387

Tuberculist Genomic Region

20018 polymerase (RNA) I polypeptide D

Details for AL513345.2 - polymerase (RNA) I polypeptide D

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20018

Tuberculist Genomic Region

28080 ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit

Details for - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28080

Tuberculist Genomic Region

58521 EP300 interacting inhibitor of differentiation 1

Details for RP23-323D9.2 - EP300 interacting inhibitor of differentiation 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58521

Tuberculist Genomic Region

67089 proteasome (prosome, macropain) 26S subunit, ATPase, 6

Details for - - proteasome (prosome, macropain) 26S subunit, ATPase, 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67089

Tuberculist Genomic Region

67196 ubiquitin-conjugating enzyme E2T (putative)

Details for - - ubiquitin-conjugating enzyme E2T (putative)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67196

Tuberculist Genomic Region

67755 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47

Details for - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67755

Tuberculist Genomic Region

68598 DnaJ (Hsp40) homolog, subfamily C, member 8

Details for RP23-63D8.7 - DnaJ (Hsp40) homolog, subfamily C, member 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68598

Tuberculist Genomic Region

70257 RIKEN cDNA 2010107E04 gene

Details for - - RIKEN cDNA 2010107E04 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70257

Tuberculist Genomic Region

77252 RIKEN cDNA 9430038I01 gene

Details for - - RIKEN cDNA 9430038I01 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77252

Tuberculist Genomic Region

78523 mitochondrial ribosomal protein L9

Details for - - mitochondrial ribosomal protein L9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78523

Tuberculist Genomic Region

83485 neugrin, neurite outgrowth associated

Details for - - neugrin, neurite outgrowth associated

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83485

Tuberculist Genomic Region

65098 zinc finger, AN1-type domain 6

Details for - - zinc finger, AN1-type domain 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 65098

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
Zfp161.1 0.645161 0.000031

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.0000000000017 NTYTTKNYTTT NA 280 ACAANATYTAAA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.28 GCGGAC NA 1.45 TCGTCCGC NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.5 TCGTCG NA NA 0.7 TTGTGNKG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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