TargetScan_133 megaCluster: 4 Residual: 0.30

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_133 4 0.30 9 0 0.426605 1

Members

Displaying 1 - 55 of 55
14942 granzyme E

Details for - - granzyme E

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14942

Tuberculist Genomic Region

15586 hyaluronoglucosaminidase 1

Details for RP23-456B9.3 - hyaluronoglucosaminidase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15586

Tuberculist Genomic Region

16411 integrin alpha X

Details for - - integrin alpha X

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16411

Tuberculist Genomic Region

21844 T cell lymphoma invasion and metastasis 1

Details for - - T cell lymphoma invasion and metastasis 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21844

Tuberculist Genomic Region

23959 5' nucleotidase, ecto

Details for - - 5' nucleotidase, ecto

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23959

Tuberculist Genomic Region

24071 synaptojanin 2 binding protein

Details for - - synaptojanin 2 binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 24071

Tuberculist Genomic Region

258643 olfactory receptor 1160

Details for RP23-131J21.1 - olfactory receptor 1160

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258643

Tuberculist Genomic Region

286940 filamin, beta

Details for - - filamin, beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 286940

Tuberculist Genomic Region

378462 MORN repeat containing 2

Details for - - MORN repeat containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 378462

Tuberculist Genomic Region

387512 taste receptor, type 2, member 135

Details for - - taste receptor, type 2, member 135

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387512

Tuberculist Genomic Region

53374 carbohydrate (chondroitin 6/keratan) sulfotransferase 3

Details for - - carbohydrate (chondroitin 6/keratan) sulfotransferase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53374

Tuberculist Genomic Region

665828 predicted gene 10654

Details for - - predicted gene 10654

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 665828

Tuberculist Genomic Region

70640 DCP2 decapping enzyme homolog (S. cerevisiae)

Details for - - DCP2 decapping enzyme homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70640

Tuberculist Genomic Region

78655 eukaryotic translation initiation factor 3, subunit J1

Details for - - eukaryotic translation initiation factor 3, subunit J1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78655

Tuberculist Genomic Region

80796 calmodulin 4

Details for - - calmodulin 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80796

Tuberculist Genomic Region

81913 BMP and activin membrane-bound inhibitor, pseudogene (Xenopus laevis)

Details for - - BMP and activin membrane-bound inhibitor, pseudogene (Xenopus laevis)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 81913

Tuberculist Genomic Region

102060 growth arrest and DNA-damage-inducible, gamma interacting protein 1

Details for - - growth arrest and DNA-damage-inducible, gamma interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 102060

Tuberculist Genomic Region

11936 FXYD domain-containing ion transport regulator 2

Details for - - FXYD domain-containing ion transport regulator 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11936

Tuberculist Genomic Region

12633 CASP8 and FADD-like apoptosis regulator

Details for - - CASP8 and FADD-like apoptosis regulator

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12633

Tuberculist Genomic Region

14362 frizzled homolog 1 (Drosophila)

Details for - - frizzled homolog 1 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14362

Tuberculist Genomic Region

14710 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2

Details for RP23-151M22.5 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14710

Tuberculist Genomic Region

15953 interferon gamma inducible protein 47

Details for RP23-54N20.3 - interferon gamma inducible protein 47

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15953

Tuberculist Genomic Region

16173 interleukin 18

Details for - - interleukin 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16173

Tuberculist Genomic Region

17436 malic enzyme 1, NADP(+)-dependent, cytosolic

Details for - - malic enzyme 1, NADP(+)-dependent, cytosolic

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17436

Tuberculist Genomic Region

213811 cDNA sequence BC002059

Details for - - cDNA sequence BC002059

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 213811

Tuberculist Genomic Region

215160 rhomboid domain containing 2

Details for - - rhomboid domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 215160

Tuberculist Genomic Region

224840 triggering receptor expressed on myeloid cells-like 4

Details for - - triggering receptor expressed on myeloid cells-like 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 224840

Tuberculist Genomic Region

227696 phytanoyl-CoA dioxygenase domain containing 1

Details for RP23-395P6.1 - phytanoyl-CoA dioxygenase domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227696

Tuberculist Genomic Region

233065 alkB, alkylation repair homolog 6 (E. coli)

Details for - - alkB, alkylation repair homolog 6 (E. coli)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233065

Tuberculist Genomic Region

23972 3'-phosphoadenosine 5'-phosphosulfate synthase 2

Details for - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23972

Tuberculist Genomic Region

240690 suppression of tumorigenicity 18

Details for - - suppression of tumorigenicity 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240690

Tuberculist Genomic Region

244891 S phase cyclin A-associated protein in the ER

Details for - - S phase cyclin A-associated protein in the ER

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 244891

Tuberculist Genomic Region

26970 phospholipase A2, group IIE

Details for RP23-352K10.7 - phospholipase A2, group IIE

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26970

Tuberculist Genomic Region

378472 vault RNA component 5

Details for - - vault RNA component 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 378472

Tuberculist Genomic Region

433287 predicted gene 15455

Details for - - predicted gene 15455

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 433287

Tuberculist Genomic Region

54519 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein

Details for RP23-114M13.3 - amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54519

Tuberculist Genomic Region

632883 predicted gene 14989

Details for - - predicted gene 14989

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 632883

Tuberculist Genomic Region

65963 transmembrane protein 176B

Details for - - transmembrane protein 176B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 65963

Tuberculist Genomic Region

66079 transmembrane protein 42

Details for - - transmembrane protein 42

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66079

Tuberculist Genomic Region

66218 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9

Details for - - NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66218

Tuberculist Genomic Region

69664 keratin associated protein 1-5

Details for RP23-272C1.5 - keratin associated protein 1-5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69664

Tuberculist Genomic Region

723827 microRNA 221

Details for - - microRNA 221

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 723827

Tuberculist Genomic Region

73379 discoidin, CUB and LCCL domain containing 2

Details for RP24-293N14.1 - discoidin, CUB and LCCL domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73379

Tuberculist Genomic Region

76073 polycomb group ring finger 5

Details for - - polycomb group ring finger 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76073

Tuberculist Genomic Region

78611 BTB (POZ) domain containing 19

Details for RP23-59L24.3 - BTB (POZ) domain containing 19

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78611

Tuberculist Genomic Region

83921 transmembrane protein 2

Details for - - transmembrane protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83921

Tuberculist Genomic Region

102122 family with sequence similarity 192, member A

Details for - - family with sequence similarity 192, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 102122

Tuberculist Genomic Region

14744 G-protein coupled receptor 65

Details for - - G-protein coupled receptor 65

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14744

Tuberculist Genomic Region

15901 inhibitor of DNA binding 1

Details for RP23-106A3.1 - inhibitor of DNA binding 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15901

Tuberculist Genomic Region

17354 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10

Details for RP23-349H7.1 - myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17354

Tuberculist Genomic Region

66043 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit

Details for - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66043

Tuberculist Genomic Region

67267 ubiquinol-cytochrome c reductase complex assembly factor 2

Details for - - ubiquinol-cytochrome c reductase complex assembly factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67267

Tuberculist Genomic Region

74257 tetraspanin 17

Details for - - tetraspanin 17

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74257

Tuberculist Genomic Region

104709 phosphoinositide-3-kinase, regulatory subunit 6

Details for RP23-432M23.3 - phosphoinositide-3-kinase, regulatory subunit 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104709

Tuberculist Genomic Region

223453 death-associated protein

Details for - - death-associated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 223453

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
Sfpi1.3 0.375 0.00000854

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000000000000022 TTYTTKTTTTNT NA 7.1 TYTTTCTNCAAA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.71 NCGGGCCC NA NA NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.5 ATACCC NA NA 0.48 CNCTAGTA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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