TargetScan_183 megaCluster: 2 Residual: 0.20

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_183 2 0.20 7 0.002 0.616713 0.991

Members

Displaying 1 - 30 of 30
14130 Fc receptor, IgG, low affinity IIb

Details for - - Fc receptor, IgG, low affinity IIb

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14130

Tuberculist Genomic Region

14977 solute carrier family 39 (zinc transporter), member 7

Details for - - solute carrier family 39 (zinc transporter), member 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14977

Tuberculist Genomic Region

20401 SH3-domain binding protein 1

Details for AL592169.1 - SH3-domain binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20401

Tuberculist Genomic Region

215772 androglobin

Details for - - androglobin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 215772

Tuberculist Genomic Region

69104 membrane-associated ring finger (C3HC4) 5

Details for - - membrane-associated ring finger (C3HC4) 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69104

Tuberculist Genomic Region

100041859 ribosomal protein L29 pseudogene

Details for - - ribosomal protein L29 pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100041859

Tuberculist Genomic Region

100504230 expressed sequence AU020206

Details for - - expressed sequence AU020206

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504230

Tuberculist Genomic Region

11630 absent in melanoma 1

Details for - - absent in melanoma 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11630

Tuberculist Genomic Region

12257 translocator protein

Details for - - translocator protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12257

Tuberculist Genomic Region

140795 purinergic receptor P2Y, G-protein coupled, 14

Details for - - purinergic receptor P2Y, G-protein coupled, 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 140795

Tuberculist Genomic Region

14190 fibrinogen-like protein 2

Details for - - fibrinogen-like protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14190

Tuberculist Genomic Region

15559 5-hydroxytryptamine (serotonin) receptor 2B

Details for - - 5-hydroxytryptamine (serotonin) receptor 2B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15559

Tuberculist Genomic Region

15950 interferon activated gene 203

Details for - - interferon activated gene 203

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15950

Tuberculist Genomic Region

17386 matrix metallopeptidase 13

Details for - - matrix metallopeptidase 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17386

Tuberculist Genomic Region

20910 syntaxin binding protein 1

Details for RP23-17P12.13-002 - syntaxin binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20910

Tuberculist Genomic Region

20969 syndecan 1

Details for - - syndecan 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20969

Tuberculist Genomic Region

22318 vesicle-associated membrane protein 2

Details for RP23-26L6.8 - vesicle-associated membrane protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22318

Tuberculist Genomic Region

230738 zinc finger CCCH type containing 12A

Details for RP23-325M14.9 - zinc finger CCCH type containing 12A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230738

Tuberculist Genomic Region

246746 CD300 antigen like family member F

Details for RP23-342L24.3 - CD300 antigen like family member F

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 246746

Tuberculist Genomic Region

26900 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked

Details for - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26900

Tuberculist Genomic Region

29863 phosphodiesterase 7B

Details for - - phosphodiesterase 7B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 29863

Tuberculist Genomic Region

52392 DNA segment, Chr 1, ERATO Doi 622, expressed

Details for - - DNA segment, Chr 1, ERATO Doi 622, expressed

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52392

Tuberculist Genomic Region

53621 CCR4-NOT transcription complex, subunit 4

Details for - - CCR4-NOT transcription complex, subunit 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53621

Tuberculist Genomic Region

66278 small integral membrane protein 20

Details for - - small integral membrane protein 20

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66278

Tuberculist Genomic Region

68473 MOB kinase activator 1B

Details for - - MOB kinase activator 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68473

Tuberculist Genomic Region

71712 DNA-damage regulated autophagy modulator 1

Details for - - DNA-damage regulated autophagy modulator 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71712

Tuberculist Genomic Region

80751 ring finger protein 34

Details for - - ring finger protein 34

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80751

Tuberculist Genomic Region

16168 interleukin 15

Details for - - interleukin 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16168

Tuberculist Genomic Region

54199 chemokine (C-C motif) receptor-like 2

Details for - - chemokine (C-C motif) receptor-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54199

Tuberculist Genomic Region

68732 leucine rich repeat containing 16A

Details for RP23-462P2.7 - leucine rich repeat containing 16A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68732

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_IRF2_Q6_M01882 0.535714 0.000000137

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.0000000018 AGAAARARAAMT NA 2.6 RAAAGGARNGAR NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.93 GCCGAG NA 1.14 GTCGCGAC NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.58 CNTAGT NA NA 0.71 GNNATTTC NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-34b-5p 0.208333 0.000047

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