TargetScan_201 megaCluster: 3 Residual: 0.19

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_201 3 0.19 15 0 0.932578 0
Displaying 1 - 34 of 34
100503498 predicted gene, 16675

Details for - - predicted gene, 16675

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503498

Tuberculist Genomic Region

102103 mitochondrial tumor suppressor 1

Details for - - mitochondrial tumor suppressor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 102103

Tuberculist Genomic Region

12289 calcium channel, voltage-dependent, L type, alpha 1D subunit

Details for - - calcium channel, voltage-dependent, L type, alpha 1D subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12289

Tuberculist Genomic Region

15439 haptoglobin

Details for - - haptoglobin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15439

Tuberculist Genomic Region

20846 signal transducer and activator of transcription 1

Details for - - signal transducer and activator of transcription 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20846

Tuberculist Genomic Region

209387 tripartite motif-containing 30D

Details for - - tripartite motif-containing 30D

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209387

Tuberculist Genomic Region

27056 interferon regulatory factor 5

Details for - - interferon regulatory factor 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27056

Tuberculist Genomic Region

320148 RIKEN cDNA B430306N03 gene

Details for - - RIKEN cDNA B430306N03 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320148

Tuberculist Genomic Region

380863 transmembrane protein 171

Details for - - transmembrane protein 171

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 380863

Tuberculist Genomic Region

432555 predicted gene 5431

Details for RP23-14F5.8 - predicted gene 5431

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 432555

Tuberculist Genomic Region

50934 solute carrier family 7 (cationic amino acid transporter, y+ system), member 8

Details for - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 50934

Tuberculist Genomic Region

574428 zinc finger, MYND-type containing 15

Details for DN-491F10.7 - zinc finger, MYND-type containing 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 574428

Tuberculist Genomic Region

107350 expressed sequence AW112010

Details for - - expressed sequence AW112010

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107350

Tuberculist Genomic Region

108670 epithelial stromal interaction 1 (breast)

Details for - - epithelial stromal interaction 1 (breast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108670

Tuberculist Genomic Region

109082 F-box and WD-40 domain protein 17

Details for - - F-box and WD-40 domain protein 17

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109082

Tuberculist Genomic Region

20723 serine (or cysteine) peptidase inhibitor, clade B, member 9

Details for RP23-391I11.1 - serine (or cysteine) peptidase inhibitor, clade B, member 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20723

Tuberculist Genomic Region

209488 hematopoietic SH2 domain containing

Details for - - hematopoietic SH2 domain containing

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209488

Tuberculist Genomic Region

211798 major facilitator superfamily domain containing 9

Details for - - major facilitator superfamily domain containing 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 211798

Tuberculist Genomic Region

21899 toll-like receptor 6

Details for - - toll-like receptor 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21899

Tuberculist Genomic Region

219132 PHD finger protein 11D

Details for mCG_13856 - PHD finger protein 11D

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 219132

Tuberculist Genomic Region

223672 apolipoprotein L 9a

Details for - - apolipoprotein L 9a

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 223672

Tuberculist Genomic Region

22436 xanthine dehydrogenase

Details for - - xanthine dehydrogenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22436

Tuberculist Genomic Region

235330 tetratricopeptide repeat domain 12

Details for - - tetratricopeptide repeat domain 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235330

Tuberculist Genomic Region

236573 guanylate-binding protein 9

Details for - - guanylate-binding protein 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 236573

Tuberculist Genomic Region

243813 leukocyte receptor cluster (LRC) member 9

Details for - - leukocyte receptor cluster (LRC) member 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 243813

Tuberculist Genomic Region

244183 tripartite motif-containing 30B

Details for - - tripartite motif-containing 30B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 244183

Tuberculist Genomic Region

327957 SLP adaptor and CSK interacting membrane protein

Details for RP23-326P7.14-001 - SLP adaptor and CSK interacting membrane protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 327957

Tuberculist Genomic Region

328830 RIKEN cDNA A530064D06 gene

Details for - - RIKEN cDNA A530064D06 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 328830

Tuberculist Genomic Region

381668 fibrosin-like 1

Details for - - fibrosin-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381668

Tuberculist Genomic Region

60361 membrane-spanning 4-domains, subfamily A, member 4B

Details for - - membrane-spanning 4-domains, subfamily A, member 4B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60361

Tuberculist Genomic Region

60504 interleukin 21 receptor

Details for - - interleukin 21 receptor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60504

Tuberculist Genomic Region

68742 transmembrane protein 219

Details for - - transmembrane protein 219

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68742

Tuberculist Genomic Region

71279 solute carrier family 29 (nucleoside transporters), member 3

Details for - - solute carrier family 29 (nucleoside transporters), member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71279

Tuberculist Genomic Region

80861 DEXH (Asp-Glu-X-His) box polypeptide 58

Details for RP23-390D17.5 - DEXH (Asp-Glu-X-His) box polypeptide 58

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80861

Tuberculist Genomic Region

TFs percTargets pValue
IRF9_IRF_full_trimeric_15_1 0.28125 0.0000206
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000000025 TWNTTTCNNTTT IRF1_MA0050.1, IRF2_MA0051.1, STAT1_MA0137.1, V$IRF1_Q6_01_M01881, V$IRF2_Q6_M01882, V$IRF_Q6_01_M00972, V$IRF_Q6_M00772, V$IRF7_01_M00453, V$IRF1_01_M00062, V$IRF1_Q6_M00747, IRF7_IRF_DBD_dimeric_14_1 0.012 TNCTNTCTCTG NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.6 CCCTTG Zfp187.2 NA NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.36 CGCAGA NA NA 0.54 GACGCRGA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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