TargetScan_52 megaCluster: 1 Residual: 0.28

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_52 1 0.28 12 0 0.795985 0

Members

Displaying 1 - 55 of 55
100503037 predicted gene, 19520

Details for - - predicted gene, 19520

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503037

Tuberculist Genomic Region

12524 CD86 antigen

Details for - - CD86 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12524

Tuberculist Genomic Region

13025 cytotoxic T lymphocyte-associated protein 2 beta

Details for - - cytotoxic T lymphocyte-associated protein 2 beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13025

Tuberculist Genomic Region

14609 gap junction protein, alpha 1

Details for - - gap junction protein, alpha 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14609

Tuberculist Genomic Region

15901 inhibitor of DNA binding 1

Details for RP23-106A3.1 - inhibitor of DNA binding 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15901

Tuberculist Genomic Region

16891 lipase, endothelial

Details for - - lipase, endothelial

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16891

Tuberculist Genomic Region

170706 transmembrane protein 37

Details for - - transmembrane protein 37

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170706

Tuberculist Genomic Region

17131 SMAD family member 7

Details for - - SMAD family member 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17131

Tuberculist Genomic Region

17436 malic enzyme 1, NADP(+)-dependent, cytosolic

Details for - - malic enzyme 1, NADP(+)-dependent, cytosolic

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17436

Tuberculist Genomic Region

18263 ornithine decarboxylase, structural 1

Details for - - ornithine decarboxylase, structural 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18263

Tuberculist Genomic Region

18591 platelet derived growth factor, B polypeptide

Details for - - platelet derived growth factor, B polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18591

Tuberculist Genomic Region

19332 RAB20, member RAS oncogene family

Details for - - RAB20, member RAS oncogene family

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19332

Tuberculist Genomic Region

20303 chemokine (C-C motif) ligand 4

Details for RP23-320E6.8 - chemokine (C-C motif) ligand 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20303

Tuberculist Genomic Region

20728 Spi-C transcription factor (Spi-1/PU.1 related)

Details for - - Spi-C transcription factor (Spi-1/PU.1 related)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20728

Tuberculist Genomic Region

212168 zinc finger SWIM-type containing 4

Details for - - zinc finger SWIM-type containing 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 212168

Tuberculist Genomic Region

214459 formin binding protein 1-like

Details for - - formin binding protein 1-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 214459

Tuberculist Genomic Region

214944 MOB kinase activator 3B

Details for RP23-454N16.6 - MOB kinase activator 3B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 214944

Tuberculist Genomic Region

22164 tumor necrosis factor (ligand) superfamily, member 4

Details for - - tumor necrosis factor (ligand) superfamily, member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22164

Tuberculist Genomic Region

22670 tripartite motif-containing 26

Details for RP23-77N9.1 - tripartite motif-containing 26

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22670

Tuberculist Genomic Region

230787 thymocyte selection associated family member 2

Details for RP23-442A20.5 - thymocyte selection associated family member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230787

Tuberculist Genomic Region

237886 schlafen 9

Details for RP23-392I13.10-002 - schlafen 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237886

Tuberculist Genomic Region

239217 potassium channel tetramerisation domain containing 12

Details for - - potassium channel tetramerisation domain containing 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 239217

Tuberculist Genomic Region

26360 angiopoietin-like 2

Details for RP23-35J6.3 - angiopoietin-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26360

Tuberculist Genomic Region

29815 breast cancer anti-estrogen resistance 3

Details for - - breast cancer anti-estrogen resistance 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 29815

Tuberculist Genomic Region

320463 RIKEN cDNA F630111L10 gene

Details for - - RIKEN cDNA F630111L10 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320463

Tuberculist Genomic Region

64213 suppression of tumorigenicity 7

Details for - - suppression of tumorigenicity 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64213

Tuberculist Genomic Region

66341 EP300 interacting inhibitor of differentiation 3

Details for - - EP300 interacting inhibitor of differentiation 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66341

Tuberculist Genomic Region

67448 plexin domain containing 2

Details for RP23-281I20.1 - plexin domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67448

Tuberculist Genomic Region

68713 interferon induced transmembrane protein 1

Details for - - interferon induced transmembrane protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68713

Tuberculist Genomic Region

72515 WD repeat domain 43

Details for - - WD repeat domain 43

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72515

Tuberculist Genomic Region

72925 membrane-associated ring finger (C3HC4) 1

Details for - - membrane-associated ring finger (C3HC4) 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72925

Tuberculist Genomic Region

73379 discoidin, CUB and LCCL domain containing 2

Details for RP24-293N14.1 - discoidin, CUB and LCCL domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73379

Tuberculist Genomic Region

75695 Rab interacting lysosomal protein-like 1

Details for MNCb-2440 - Rab interacting lysosomal protein-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75695

Tuberculist Genomic Region

76073 polycomb group ring finger 5

Details for - - polycomb group ring finger 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76073

Tuberculist Genomic Region

80914 uridine-cytidine kinase 2

Details for - - uridine-cytidine kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80914

Tuberculist Genomic Region

83921 transmembrane protein 2

Details for - - transmembrane protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83921

Tuberculist Genomic Region

16363 interferon regulatory factor 2

Details for - - interferon regulatory factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16363

Tuberculist Genomic Region

18034 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18034

Tuberculist Genomic Region

211550 TRAF-interacting protein with forkhead-associated domain

Details for - - TRAF-interacting protein with forkhead-associated domain

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 211550

Tuberculist Genomic Region

634650 guanylate binding protein 11

Details for - - guanylate binding protein 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 634650

Tuberculist Genomic Region

104709 phosphoinositide-3-kinase, regulatory subunit 6

Details for RP23-432M23.3 - phosphoinositide-3-kinase, regulatory subunit 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104709

Tuberculist Genomic Region

107569 5'-nucleotidase, cytosolic III

Details for - - 5'-nucleotidase, cytosolic III

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107569

Tuberculist Genomic Region

14042 exostoses (multiple) 1

Details for - - exostoses (multiple) 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14042

Tuberculist Genomic Region

15903 inhibitor of DNA binding 3

Details for RP23-118A9.1 - inhibitor of DNA binding 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15903

Tuberculist Genomic Region

16362 interferon regulatory factor 1

Details for RP23-303F24.1 - interferon regulatory factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16362

Tuberculist Genomic Region

16468 jumonji, AT rich interactive domain 2

Details for - - jumonji, AT rich interactive domain 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16468

Tuberculist Genomic Region

17386 matrix metallopeptidase 13

Details for - - matrix metallopeptidase 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17386

Tuberculist Genomic Region

17873 growth arrest and DNA-damage-inducible 45 beta

Details for - - growth arrest and DNA-damage-inducible 45 beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17873

Tuberculist Genomic Region

20821 tripartite motif-containing 21

Details for - - tripartite motif-containing 21

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20821

Tuberculist Genomic Region

21939 CD40 antigen

Details for RP23-428M13.1 - CD40 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21939

Tuberculist Genomic Region

245944 vacuolar protein sorting 54 (yeast)

Details for RP23-154K13.1 - vacuolar protein sorting 54 (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 245944

Tuberculist Genomic Region

434484 Sp140 nuclear body protein

Details for - - Sp140 nuclear body protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 434484

Tuberculist Genomic Region

70435 inverted formin, FH2 and WH2 domain containing

Details for - - inverted formin, FH2 and WH2 domain containing

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70435

Tuberculist Genomic Region

84035 kringle containing transmembrane protein 1

Details for RP23-293J16.1 - kringle containing transmembrane protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 84035

Tuberculist Genomic Region

17119 MAX dimerization protein 1

Details for - - MAX dimerization protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17119

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
Pax4_MA0068.1 0.641509 0.00000000921

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
2.1e-21 AAAAAAAAAAAA NA 0.001 CTYTTNCTCYCT NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.98 GCGGCT NA 0.94 TCGCACCG NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.61 CGGTCG NA NA 0.58 CCCGGTCG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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