TargetScan_62 megaCluster: 9 Residual: 0.27

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_62 9 0.27 15 0 0.874932 0

Members

Displaying 1 - 51 of 51
100126824 SCO cytochrome oxidase deficient homolog 2 (yeast)

Details for - - SCO cytochrome oxidase deficient homolog 2 (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100126824

Tuberculist Genomic Region

13555 acireductone dioxygenase 1

Details for - - acireductone dioxygenase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104923

Tuberculist Genomic Region

15108 serine hydroxymethyltransferase 2 (mitochondrial)

Details for - - serine hydroxymethyltransferase 2 (mitochondrial)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108037

Tuberculist Genomic Region

16848 E2F transcription factor 1

Details for RP23-109C16.5 - E2F transcription factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13555

Tuberculist Genomic Region

171207 hydroxysteroid (17-beta) dehydrogenase 10

Details for RP23-419G22.2 - hydroxysteroid (17-beta) dehydrogenase 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15108

Tuberculist Genomic Region

18516 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

Details for - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16848

Tuberculist Genomic Region

18569 Rho GTPase activating protein 4

Details for RP23-252M19.2 - Rho GTPase activating protein 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 171207

Tuberculist Genomic Region

18718 pre B cell leukemia homeobox 3

Details for RP23-438I5.1 - pre B cell leukemia homeobox 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18516

Tuberculist Genomic Region

20597 programmed cell death 4

Details for - - programmed cell death 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18569

Tuberculist Genomic Region

208518 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha

Details for RP23-396N6.6 - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18718

Tuberculist Genomic Region

224454 sphingomyelin phosphodiesterase 1, acid lysosomal

Details for - - sphingomyelin phosphodiesterase 1, acid lysosomal

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20597

Tuberculist Genomic Region

233280 centrosomal protein 78

Details for - - centrosomal protein 78

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208518

Tuberculist Genomic Region

234515 zinc finger, DHHC domain containing 14

Details for - - zinc finger, DHHC domain containing 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 224454

Tuberculist Genomic Region

235527 non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)

Details for - - non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233280

Tuberculist Genomic Region

237860 inositol polyphosphate-4-phosphatase, type II

Details for - - inositol polyphosphate-4-phosphatase, type II

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234515

Tuberculist Genomic Region

23825 phospholipid scramblase 4

Details for - - phospholipid scramblase 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235527

Tuberculist Genomic Region

26429 slingshot homolog 2 (Drosophila)

Details for RP23-285D3.1 - slingshot homolog 2 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237860

Tuberculist Genomic Region

28113 barrier to autointegration factor 1

Details for - - barrier to autointegration factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23825

Tuberculist Genomic Region

319625 origin recognition complex, subunit 5

Details for - - origin recognition complex, subunit 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26429

Tuberculist Genomic Region

52585 Terf1 (TRF1)-interacting nuclear factor 2

Details for - - Terf1 (TRF1)-interacting nuclear factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28113

Tuberculist Genomic Region

54197 galactose mutarotase

Details for - - galactose mutarotase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319625

Tuberculist Genomic Region

64540 dehydrogenase/reductase (SDR family) member 1

Details for - - dehydrogenase/reductase (SDR family) member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52585

Tuberculist Genomic Region

66089 ring finger protein 5

Details for - - ring finger protein 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54197

Tuberculist Genomic Region

66270 tetraspanin 4

Details for - - tetraspanin 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64540

Tuberculist Genomic Region

66315 required for meiotic nuclear division 5 homolog B (S. cerevisiae)

Details for RP23-79E13.4 - required for meiotic nuclear division 5 homolog B (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66089

Tuberculist Genomic Region

66329 family with sequence similarity 134, member B

Details for - - family with sequence similarity 134, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66270

Tuberculist Genomic Region

66847 SUMO1/sentrin specific peptidase 7

Details for - - SUMO1/sentrin specific peptidase 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66315

Tuberculist Genomic Region

66939 sushi domain containing 3

Details for - - sushi domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66329

Tuberculist Genomic Region

69639 histidine triad nucleotide binding protein 3

Details for - - histidine triad nucleotide binding protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66847

Tuberculist Genomic Region

69900 alpha- and gamma-adaptin binding protein

Details for - - alpha- and gamma-adaptin binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66939

Tuberculist Genomic Region

72720 exosome component 8

Details for - - exosome component 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69639

Tuberculist Genomic Region

73338 major facilitator superfamily domain containing 11

Details for RP23-468A19.8 - major facilitator superfamily domain containing 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69900

Tuberculist Genomic Region

74158 zinc finger protein 248

Details for - - zinc finger protein 248

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72720

Tuberculist Genomic Region

75565 inositol 1,4,5-triphosphate receptor interacting protein-like 1

Details for RP23-26A12.4 - inositol 1,4,5-triphosphate receptor interacting protein-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73338

Tuberculist Genomic Region

80290 Josephin domain containing 1

Details for - - Josephin domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74158

Tuberculist Genomic Region

11856 coiled-coil domain containing 101

Details for - - coiled-coil domain containing 101

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75565

Tuberculist Genomic Region

15064 G protein-coupled receptor 146

Details for - - G protein-coupled receptor 146

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80290

Tuberculist Genomic Region

17095 Rho GTPase activating protein 6

Details for RP23-24O15.2 - Rho GTPase activating protein 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11856

Tuberculist Genomic Region

18755 major histocompatibility complex, class I-related

Details for - - major histocompatibility complex, class I-related

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15064

Tuberculist Genomic Region

210582 lymphoblastomic leukemia 1

Details for - - lymphoblastomic leukemia 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17095

Tuberculist Genomic Region

235627 protein kinase C, eta

Details for - - protein kinase C, eta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18755

Tuberculist Genomic Region

29812 coenzyme Q10 homolog A (yeast)

Details for - - coenzyme Q10 homolog A (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210582

Tuberculist Genomic Region

320209 neurobeachin-like 2

Details for - - neurobeachin-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235627

Tuberculist Genomic Region

381810 N-myc downstream regulated gene 3

Details for RP24-482A24.9 - N-myc downstream regulated gene 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 29812

Tuberculist Genomic Region

382406 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11

Details for - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320209

Tuberculist Genomic Region

72203 lysophosphatidic acid receptor 5

Details for - - lysophosphatidic acid receptor 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381810

Tuberculist Genomic Region

74136 POC1 centriolar protein homolog B (Chlamydomonas)

Details for - - POC1 centriolar protein homolog B (Chlamydomonas)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 382406

Tuberculist Genomic Region

98682 RIKEN cDNA 2610507I01 gene

Details for - - RIKEN cDNA 2610507I01 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72203

Tuberculist Genomic Region

74760 SEC14-like 1 (S. cerevisiae)

Details for RP23-41E14.7 - SEC14-like 1 (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74136

Tuberculist Genomic Region

Details for - - major facilitator superfamily domain containing 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 98682

Tuberculist Genomic Region

Details for - - RAB3A interacting protein (rabin3)-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74760

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
RAX_homeodomain_DBD_monomeric_10_1 0.12 0.000000785

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.22 GTCGCG Zfp161.2, Max.2 1.24 CGNCGCGC Zfp161.2, E2F3.1, E2F2.1, Zfp161.1

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.46 AGNGGA NA NA 0.59 AGNRGASG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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