TargetScan_88 megaCluster: 11 Residual: 0.18

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_88	11	0.18	15	0	0.940319	0

Members

Displaying 1 - 46 of 46

TFBS DB TF

TFs	percTargets	pValue
V_HB24_01_M01399	0.121951	0.000000778

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.0000089	NGGGGCGGGGS	Klf4_MA0039.2, SP1_MA0079.2, SP1_MA0079.1, V$SP4_Q5_M01273, V$SP1_Q6_M00196, V$SP1_Q6_01_M00931, V$SP1_02_M01303, V$SP1_Q4_01_M00932, V$SP1_Q2_01_M00933, V$GC_01_M00255, V$KLF7_03_M02773, V$GKLF_02_M01588, V$CKROX_Q2_M01175, V$ZFP281_01_M01597, V$SP1_03_M02281, V$MAZR_01_M00491, V$UF1H3BETA_Q6_M01068, V$MAZ_Q6_M00649, V$SP4_03_M02810, V$BCL6B_04_M02844, V$SP1_01_M00008, V$SMAD4_04_M02898, V$ZFP410_04_M02936, V$ZBP89_Q4_M01816, V$E2F3_Q6_M02089, V$CACD_01_M01113, V$ETF_Q6_M00695, V$ZFP281_04_M02831, V$SP2_01_M01783, V$MAZ_Q6_01_M02023, V$KLF15_Q2_M01714, V$SP1SP3_Q4_M01219, V$EGR1_Q6_M01873, V$EKLF_Q5_M01874, V$FKLF_Q5_M01837, V$EGR1_06_M02744, V$KROX_Q6_M00982, V$WT1_Q6_01_M02036, V$ZNF219_01_M01122, V$ZFP740_03_M02834, V$CACCCBINDINGFACTOR_Q6_M00721, Klf7.1, Sp4.1, Bcl6b.2, Zfp410.1, Smad3.1, Zfp281.2, Egr1.1, Zfp740.1, Ascl2.2, Sp4.2, SP1_C2H2_DBD_monomeric_11_1, KLF16_C2H2_DBD_monomeric_11_1, SP4_C2H2_full_monomeric_17_1, SP3_C2H2_DBD_monomeric_11_1, SP8_C2H2_DBD_monomeric_12_1, KLF13_C2H2_full_monomeric_18_1, KLF14_C2H2_DBD_monomeric_14_1, Klf12_C2H2_DBD_monomeric_15_1, ZNF740_C2H2_full_monomeric_10_1, Zfp740_C2H2_DBD_monomeric_10_1	2.3	AAAAANARMAAT	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.54	GACGCG	NA	1.52	GNGGCGCG	V$E2F_Q2_M00803, Smad3.1, E2F2.1, E2F3.1, Zfp161.1, Zfp410.1, Bcl6b.2

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.51	GTTGGAAN	NA	NA		NA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
mmu-miR-208a-5p	0.459459	0.0000156

100037258 DnaJ (Hsp40) homolog, subfamily C, member 3 Details for - - DnaJ (Hsp40) homolog, subfamily C, member 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100037258 Tuberculist Genomic Region	100039740 ribosomal protein S18 pseudogene Details for - - ribosomal protein S18 pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100039740 Tuberculist Genomic Region
100503331 high mobility group nucleosomal binding domain 2 pseudogene Details for - - high mobility group nucleosomal binding domain 2 pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100503331 Tuberculist Genomic Region	107566 ADP-ribosylation factor-like 2 binding protein Details for - - ADP-ribosylation factor-like 2 binding protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 107566 Tuberculist Genomic Region
108797 mex3 homolog B (C. elegans) Details for - - mex3 homolog B (C. elegans) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108797 Tuberculist Genomic Region	12304 protein disulfide isomerase associated 4 Details for - - protein disulfide isomerase associated 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12304 Tuberculist Genomic Region
12663 choroideremia-like Details for - - choroideremia-like GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12663 Tuberculist Genomic Region	16548 ketohexokinase Details for - - ketohexokinase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16548 Tuberculist Genomic Region
18242 ornithine aminotransferase Details for - - ornithine aminotransferase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18242 Tuberculist Genomic Region	195434 UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) Details for - - UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 195434 Tuberculist Genomic Region
20174 RuvB-like protein 2 Details for - - RuvB-like protein 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20174 Tuberculist Genomic Region	20719 serine (or cysteine) peptidase inhibitor, clade B, member 6a Details for RP23-262J21.1 - serine (or cysteine) peptidase inhibitor, clade B, member 6a GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20719 Tuberculist Genomic Region
212285 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 Details for - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 212285 Tuberculist Genomic Region	229317 eukaryotic translation initiation factor 2A Details for - - eukaryotic translation initiation factor 2A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 229317 Tuberculist Genomic Region
269423 RIKEN cDNA 3110057O12 gene Details for - - RIKEN cDNA 3110057O12 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 269423 Tuberculist Genomic Region	319504 neuron-glia-CAM-related cell adhesion molecule Details for - - neuron-glia-CAM-related cell adhesion molecule GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 319504 Tuberculist Genomic Region
381650 THAP domain containing 6 Details for - - THAP domain containing 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 381650 Tuberculist Genomic Region	399101 small nucleolar RNA host gene (non-protein coding) 3 Details for - - small nucleolar RNA host gene (non-protein coding) 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 399101 Tuberculist Genomic Region
54725 cell adhesion molecule 1 Details for - - cell adhesion molecule 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54725 Tuberculist Genomic Region	66146 transmembrane protein 57 Details for RP23-191E19.1 - transmembrane protein 57 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66146 Tuberculist Genomic Region
66181 NOP10 ribonucleoprotein Details for RP23-63C10.4 - NOP10 ribonucleoprotein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66181 Tuberculist Genomic Region	66286 SEC11 homolog C (S. cerevisiae) Details for - - SEC11 homolog C (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66286 Tuberculist Genomic Region
67705 RIKEN cDNA 1810058I24 gene Details for - - RIKEN cDNA 1810058I24 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67705 Tuberculist Genomic Region	68135 eukaryotic translation initiation factor 3, subunit H Details for - - eukaryotic translation initiation factor 3, subunit H GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68135 Tuberculist Genomic Region
70829 coiled-coil domain containing 93 Details for - - coiled-coil domain containing 93 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70829 Tuberculist Genomic Region	74107 centrosomal protein 55 Details for - - centrosomal protein 55 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74107 Tuberculist Genomic Region
84652 family with sequence similarity 126, member A Details for - - family with sequence similarity 126, member A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 84652 Tuberculist Genomic Region	110095 liver glycogen phosphorylase Details for - - liver glycogen phosphorylase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 110095 Tuberculist Genomic Region
15452 hypoxanthine guanine phosphoribosyl transferase Details for RP23-173F3.3 - hypoxanthine guanine phosphoribosyl transferase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15452 Tuberculist Genomic Region	246707 elastin microfibril interfacer 2 Details for - - elastin microfibril interfacer 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 246707 Tuberculist Genomic Region
269470 WD repeat domain 3 Details for - - WD repeat domain 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 269470 Tuberculist Genomic Region	66870 serpine1 mRNA binding protein 1 Details for - - serpine1 mRNA binding protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66870 Tuberculist Genomic Region
66978 Luc7 homolog (S. cerevisiae)-like Details for - - Luc7 homolog (S. cerevisiae)-like GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66978 Tuberculist Genomic Region	67891 ribosomal protein L4 Details for - - ribosomal protein L4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67891 Tuberculist Genomic Region
75296 Fgfr1 oncogene partner Details for - - Fgfr1 oncogene partner GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75296 Tuberculist Genomic Region	13682 eukaryotic translation initiation factor 4A2 Details for - - eukaryotic translation initiation factor 4A2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13682 Tuberculist Genomic Region
15388 heterogeneous nuclear ribonucleoprotein L Details for - - heterogeneous nuclear ribonucleoprotein L GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15388 Tuberculist Genomic Region	16211 karyopherin (importin) beta 1 Details for RP23-81D2.3 - karyopherin (importin) beta 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16211 Tuberculist Genomic Region
50799 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 Details for - - solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50799 Tuberculist Genomic Region	66156 anaphase promoting complex subunit 11 Details for RP23-84C12.5 - anaphase promoting complex subunit 11 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66156 Tuberculist Genomic Region
66586 cardiolipin synthase 1 Details for RP23-77H16.4 - cardiolipin synthase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66586 Tuberculist Genomic Region	69957 CDC16 cell division cycle 16 Details for - - CDC16 cell division cycle 16 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 69957 Tuberculist Genomic Region
74205 acyl-CoA synthetase long-chain family member 3 Details for - - acyl-CoA synthetase long-chain family member 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74205 Tuberculist Genomic Region	75619 FAST kinase domains 2 Details for - - FAST kinase domains 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75619 Tuberculist Genomic Region
98386 lamin B receptor Details for - - lamin B receptor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 98386 Tuberculist Genomic Region	14194 fumarate hydratase 1 Details for - - fumarate hydratase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14194 Tuberculist Genomic Region

TargetScan_88 megaCluster: 11 Residual: 0.18

Summary

Members

Details for - - DnaJ (Hsp40) homolog, subfamily C, member 3

Details for - - ribosomal protein S18 pseudogene

Details for - - high mobility group nucleosomal binding domain 2 pseudogene

Details for - - ADP-ribosylation factor-like 2 binding protein

Details for - - mex3 homolog B (C. elegans)

Details for - - protein disulfide isomerase associated 4

Details for - - choroideremia-like

Details for - - ketohexokinase

Details for - - ornithine aminotransferase

Details for - - UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)

Details for - - RuvB-like protein 2

Details for RP23-262J21.1 - serine (or cysteine) peptidase inhibitor, clade B, member 6a

Details for - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2

Details for - - eukaryotic translation initiation factor 2A

Details for - - RIKEN cDNA 3110057O12 gene

Details for - - neuron-glia-CAM-related cell adhesion molecule

Details for - - THAP domain containing 6

Details for - - small nucleolar RNA host gene (non-protein coding) 3

Details for - - cell adhesion molecule 1

Details for RP23-191E19.1 - transmembrane protein 57

Details for RP23-63C10.4 - NOP10 ribonucleoprotein

Details for - - SEC11 homolog C (S. cerevisiae)

Details for - - RIKEN cDNA 1810058I24 gene

Details for - - eukaryotic translation initiation factor 3, subunit H

Details for - - coiled-coil domain containing 93

Details for - - centrosomal protein 55

Details for - - family with sequence similarity 126, member A

Details for - - liver glycogen phosphorylase

Details for RP23-173F3.3 - hypoxanthine guanine phosphoribosyl transferase

Details for - - elastin microfibril interfacer 2

Details for - - WD repeat domain 3

Details for - - serpine1 mRNA binding protein 1

Details for - - Luc7 homolog (S. cerevisiae)-like

Details for - - ribosomal protein L4

Details for - - Fgfr1 oncogene partner

Details for - - eukaryotic translation initiation factor 4A2

Details for - - heterogeneous nuclear ribonucleoprotein L

Details for RP23-81D2.3 - karyopherin (importin) beta 1

Details for - - solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13

Details for RP23-84C12.5 - anaphase promoting complex subunit 11

Details for RP23-77H16.4 - cardiolipin synthase 1

Details for - - CDC16 cell division cycle 16

Details for - - acyl-CoA synthetase long-chain family member 3

Details for - - FAST kinase domains 2

Details for - - lamin B receptor

Details for - - fumarate hydratase 1

GO Terms

3p UTR PITA