PITA_100 megaCluster: 11 Residual: 0.08

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_100 11 0.08 15 0 0.99007 0

Members

Displaying 1 - 17 of 17
108912 cell division cycle associated 2

Details for - - cell division cycle associated 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108912

Tuberculist Genomic Region

12316 asp (abnormal spindle)-like, microcephaly associated (Drosophila)

Details for AC158946.1 - asp (abnormal spindle)-like, microcephaly associated (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12316

Tuberculist Genomic Region

14793 cell division cycle associated 3

Details for - - cell division cycle associated 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14793

Tuberculist Genomic Region

16571 kinesin family member 4

Details for RP23-213F21.3 - kinesin family member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16571

Tuberculist Genomic Region

19348 kinesin family member 20A

Details for - - kinesin family member 20A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19348

Tuberculist Genomic Region

52276 cell division cycle associated 8

Details for RP23-168M5.8 - cell division cycle associated 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52276

Tuberculist Genomic Region

56419 diaphanous homolog 3 (Drosophila)

Details for - - diaphanous homolog 3 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56419

Tuberculist Genomic Region

68026 RIKEN cDNA 2810417H13 gene

Details for - - RIKEN cDNA 2810417H13 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68026

Tuberculist Genomic Region

71819 kinesin family member 23

Details for - - kinesin family member 23

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71819

Tuberculist Genomic Region

73804 kinesin family member 2C

Details for RP23-59L24.10-001 - kinesin family member 2C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73804

Tuberculist Genomic Region

80986 cytoskeleton associated protein 2

Details for - - cytoskeleton associated protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80986

Tuberculist Genomic Region

110033 kinesin family member 22

Details for - - kinesin family member 22

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110033

Tuberculist Genomic Region

12449 cyclin F

Details for - - cyclin F

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12449

Tuberculist Genomic Region

17279 maternal embryonic leucine zipper kinase

Details for RP23-382O11.1 - maternal embryonic leucine zipper kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17279

Tuberculist Genomic Region

20878 aurora kinase A

Details for - - aurora kinase A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20878

Tuberculist Genomic Region

22137 Ttk protein kinase

Details for - - Ttk protein kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22137

Tuberculist Genomic Region

224171 RIKEN cDNA C330027C09 gene

Details for - - RIKEN cDNA C330027C09 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 224171

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_ZFP281_01_M01597 1 0

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.02 AWNAAAMAAAAA NA 0.04 TTTNWRATTKNY NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.44 TTCCGG ELK1_MA0028.1, GABPA_MA0062.2, GABPA_MA0062.1, ELK4_MA0076.1, Stat3_MA0144.1, V$TR4_01_M01776, V$ERG_01_M01752, V$ELK1_06_M02059, V$GADP_01_M01258, V$ELF1_01_M01975, V$NRF2_01_M00108, V$FLI1_02_M02073, V$FLI1_01_M02038, V$ERG_03_M02062, V$GABP_B_M00341, V$NERF_01_M01976, V$ELF4_01_M01979, V$ELF2_02_M02054, V$ELF4_02_M02056, V$ELK1_04_M01165, V$ELK1_03_M01163, V$NET_02_M02060, V$SAP1A_03_M02058, V$ER81_02_M02065, V$SAP1A_01_M01167, V$GABPA_01_M02039, V$ELK1_05_M01981, V$ERG_02_M01985, V$ERM_01_M01992, V$ERM_02_M02069, V$ELF_02_M02053, V$SAP1A_02_M01983, V$ELK1_02_M00025, V$ER81_01_M01987, V$PEA3_01_M01991, V$PEA3_02_M02066, V$NET_01_M01982, V$ETV7_01_M02071, V$ETV3_02_M02068, V$PET1_01_M02037, V$CETS1_01_M01986, V$STAT1_01_M00224, V$EHF_06_M02745, V$GABPA_02_M02074, V$ERF_02_M02061, V$ER71_02_M02067, V$CETS2_01_M01989, V$ETV3_01_M01990, V$ERF_01_M01984, V$PET1_02_M02072, V$CETS2_02_M02064, V$ER71_01_M01988, V$DEAF1_01_M01001, V$EHF_02_M01974, V$CETS1_02_M02063, V$CETS168_Q6_M00743, V$CETS1P54_01_M00032, V$ESE1_Q3_M01214, V$ESE1_01_M01977, V$ESE1_02_M02055, V$PAX_Q6_M00808, V$TEL1_01_M01993, V$TEL1_02_M02070, V$GABPBETA_Q3_M01876, V$ELF5_02_M01980, V$ELF5_03_M02057, V$EHF_03_M02052, V$STAT3_01_M00225, V$FEV_01_M02269, V$MECP2_02_M01299, V$STAT1STAT1_Q3_M01212, V$DEAF1_02_M01002, Elf4.1, Elk3.1, Gm4881.1, Elk1.1, Elf2.1, Erg.1, Elk4.1, Etv3.1, Fli1.1, Ets1.1, Gabpa.3, Etv1.1, Etv6.1, Ehf.3, Gm5454.1, Etv4.1, Ehf.2, Etv5.1, Elf3.3, Sp100.1, Spdef.1, Elf3.2, ELF1_ETS_full_monomeric_12_1, ERF_ETS_DBD_monomeric_10_1, ERG_ETS_full_monomeric_10_1, ETV2_ETS_DBD_monomeric_11_1, FLI1_ETS_full_monomeric_10_1, ELK4_ETS_DBD_monomeric_10_1, ELK1_ETS_full_monomeric_10_1, ELF3_ETS_DBD_monomeric_12_1, Elk3_ETS_DBD_monomeric_10_1, ETV3_ETS_DBD_monomeric_10_1, ELF4_ETS_full_monomeric_12_1, ETV6_ETS_full_dimeric_15_1, ELF3_ETS_full_monomeric_13_1, GABPA_ETS_full_monomeric_10_1, ETS1_ETS_full_monomeric_10_1, EHF_ETS_full_monomeric_12_1, FEV_ETS_DBD_monomeric_10_1, ETV1_ETS_DBD_monomeric_10_1, ETV4_ETS_DBD_monomeric_10_1, FLI1_ETS_full_monomeric_14_1, ETS1_ETS_full_dimeric_18_1, ERG_ETS_full_dimeric_14_1 1.61 GCCAATCA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.69 ATCGTT NA NA 1.12 GCNNCCTA mmu-mir-5617-3p 7mer_a1

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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