PITA_102 megaCluster: 7 Residual: 0.21

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_102	7	0.21	15	0	0.918685	0

Members

Displaying 1 - 67 of 67

TFBS DB TF

TFs	percTargets	pValue
V_HFH4_01_M00742	0.287879	0.0000357

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.00000000000059	TTTTNWTTTKTT	NA	0.0000015	SGCCCCGCCCC	Klf4_MA0039.2, SP1_MA0079.2, SP1_MA0079.1, V$SP1_Q6_M00196, V$KLF7_03_M02773, V$SP4_Q5_M01273, V$SP1_Q6_01_M00931, V$SP1_Q4_01_M00932, V$GKLF_02_M01588, V$GC_01_M00255, V$SP1_02_M01303, V$SP4_03_M02810, V$SP1_Q2_01_M00933, V$SP1_01_M00008, V$SP1_03_M02281, V$MAZR_01_M00491, V$UF1H3BETA_Q6_M01068, V$CKROX_Q2_M01175, V$E2F3_Q6_M02089, V$CACD_01_M01113, V$SP2_01_M01783, V$ZFP281_01_M01597, V$SMAD4_04_M02898, V$KROX_Q6_M00982, V$MAZ_Q6_M00649, V$EGR1_06_M02744, V$EGR1_Q6_M01873, V$ZFP281_04_M02831, V$SP4_04_M02914, V$EKLF_Q5_M01874, V$ZFP740_03_M02834, V$BCL6B_04_M02844, V$ZBP89_Q4_M01816, V$ZNF219_01_M01122, V$WT1_Q6_01_M02036, V$CACCCBINDINGFACTOR_Q6_M00721, V$MAZ_Q6_01_M02023, V$ZFP410_04_M02936, V$KLF15_Q2_M01714, V$CNOT3_01_M01253, V$E2F_Q2_M00803, Klf7.1, Sp4.1, Smad3.1, Egr1.1, Sp4.2, Zfp281.2, Zfp740.1, Bcl6b.2, Zfp410.1, Zif268.1, Klf7.2, Ascl2.2, SP4_C2H2_full_monomeric_17_1, KLF14_C2H2_DBD_monomeric_14_1, KLF16_C2H2_DBD_monomeric_11_1, KLF13_C2H2_full_monomeric_18_1, SP1_C2H2_DBD_monomeric_11_1, Klf12_C2H2_DBD_monomeric_15_1, SP3_C2H2_DBD_monomeric_11_1, SP8_C2H2_DBD_monomeric_12_1, Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.15	CGCCGT	NA	1.14	GCGCTTCG	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.39	TCGCGG	NA	NA	0.48	ATCGCGGT	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

100502698 RIKEN cDNA 1700021K19 gene Details for mCG_130134 - RIKEN cDNA 1700021K19 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100502698 Tuberculist Genomic Region	108645 methionine adenosyltransferase II, beta Details for RP23-382C18.2 - methionine adenosyltransferase II, beta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108645 Tuberculist Genomic Region
108682 glutamic pyruvate transaminase (alanine aminotransferase) 2 Details for - - glutamic pyruvate transaminase (alanine aminotransferase) 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108682 Tuberculist Genomic Region	12764 cytidine monophospho-N-acetylneuraminic acid synthetase Details for - - cytidine monophospho-N-acetylneuraminic acid synthetase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12764 Tuberculist Genomic Region
20585 helicase-like transcription factor Details for - - helicase-like transcription factor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20585 Tuberculist Genomic Region	20598 sphingomyelin phosphodiesterase 2, neutral Details for - - sphingomyelin phosphodiesterase 2, neutral GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20598 Tuberculist Genomic Region
214895 lectin, mannose-binding 2-like Details for - - lectin, mannose-binding 2-like GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 214895 Tuberculist Genomic Region	214952 ras homolog gene family, member T2 Details for - - ras homolog gene family, member T2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 214952 Tuberculist Genomic Region
217737 AHA1, activator of heat shock protein ATPase 1 Details for - - AHA1, activator of heat shock protein ATPase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 217737 Tuberculist Genomic Region	22591 xeroderma pigmentosum, complementation group C Details for - - xeroderma pigmentosum, complementation group C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22591 Tuberculist Genomic Region
232536 mitochondrial ribosomal protein S35 Details for RP23-157O3.2 - mitochondrial ribosomal protein S35 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 232536 Tuberculist Genomic Region	233204 TBC1 domain family, member 17 Details for - - TBC1 domain family, member 17 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 233204 Tuberculist Genomic Region
30838 F-box and WD-40 domain protein 4 Details for - - F-box and WD-40 domain protein 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 30838 Tuberculist Genomic Region	67710 polymerase (RNA) II (DNA directed) polypeptide G Details for - - polymerase (RNA) II (DNA directed) polypeptide G GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67710 Tuberculist Genomic Region
67939 prolyl-tRNA synthetase domain containing 1 Details for RP23-92B18.3 - prolyl-tRNA synthetase domain containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67939 Tuberculist Genomic Region	70823 HMG box domain containing 4 Details for AL603864.1 - HMG box domain containing 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70823 Tuberculist Genomic Region
71732 vacuolar protein sorting 11 (yeast) Details for - - vacuolar protein sorting 11 (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71732 Tuberculist Genomic Region	71918 zinc finger, CCHC domain containing 24 Details for - - zinc finger, CCHC domain containing 24 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71918 Tuberculist Genomic Region
72039 methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) Details for - - methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72039 Tuberculist Genomic Region	73825 protein phosphatase 1, regulatory subunit 21 Details for - - protein phosphatase 1, regulatory subunit 21 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 73825 Tuberculist Genomic Region
74764 kinesin light chain 4 Details for - - kinesin light chain 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74764 Tuberculist Genomic Region	76795 TBC1 domain family, member 9B Details for RP23-319B15.5 - TBC1 domain family, member 9B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76795 Tuberculist Genomic Region
93747 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial Details for - - enoyl Coenzyme A hydratase, short chain, 1, mitochondrial GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 93747 Tuberculist Genomic Region	100177 zinc finger, MYM-type 6 Details for RP23-153M14.7 - zinc finger, MYM-type 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100177 Tuberculist Genomic Region
106504 serine/threonine kinase 38 Details for - - serine/threonine kinase 38 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 106504 Tuberculist Genomic Region	12371 caspase 9 Details for RP23-395H4.3 - caspase 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12371 Tuberculist Genomic Region
192678 Ras association (RalGDS/AF-6) domain family member 3 Details for - - Ras association (RalGDS/AF-6) domain family member 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 192678 Tuberculist Genomic Region	225049 tetratricopeptide repeat domain 7 Details for - - tetratricopeptide repeat domain 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 225049 Tuberculist Genomic Region
234413 zinc finger protein 961 Details for - - zinc finger protein 961 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 234413 Tuberculist Genomic Region	234854 cyclin-dependent kinase 10 Details for - - cyclin-dependent kinase 10 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 234854 Tuberculist Genomic Region
23854 differentially expressed in FDCP 8 Details for - - differentially expressed in FDCP 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 23854 Tuberculist Genomic Region	26401 mitogen-activated protein kinase kinase kinase 1 Details for - - mitogen-activated protein kinase kinase kinase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 26401 Tuberculist Genomic Region
66279 transmembrane protein 218 Details for - - transmembrane protein 218 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66279 Tuberculist Genomic Region	66401 nudix (nucleoside diphosphate linked moiety X)-type motif 2 Details for RP23-100C7.1 - nudix (nucleoside diphosphate linked moiety X)-type motif 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66401 Tuberculist Genomic Region
67099 methyltransferase like 21A Details for - - methyltransferase like 21A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67099 Tuberculist Genomic Region	70510 ring finger protein 167 Details for DN-183N8.14-002 - ring finger protein 167 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70510 Tuberculist Genomic Region
73747 RIKEN cDNA 1110034G24 gene Details for RP23-391A14.5 - RIKEN cDNA 1110034G24 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 73747 Tuberculist Genomic Region	74192 actin related protein 2/3 complex, subunit 5-like Details for RP23-244N6.5 - actin related protein 2/3 complex, subunit 5-like GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74192 Tuberculist Genomic Region
76972 RIKEN cDNA 2810008D09 gene Details for - - RIKEN cDNA 2810008D09 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76972 Tuberculist Genomic Region	100900 HscB iron-sulfur cluster co-chaperone homolog (E. coli) Details for - - HscB iron-sulfur cluster co-chaperone homolog (E. coli) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100900 Tuberculist Genomic Region
100929 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) Details for - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100929 Tuberculist Genomic Region	11518 adducin 1 (alpha) Details for - - adducin 1 (alpha) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11518 Tuberculist Genomic Region
20817 serine/arginine-rich protein specific kinase 2 Details for - - serine/arginine-rich protein specific kinase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20817 Tuberculist Genomic Region	217473 ankyrin repeat and MYND domain containing 2 Details for - - ankyrin repeat and MYND domain containing 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 217473 Tuberculist Genomic Region
226539 aspartyl-tRNA synthetase 2 (mitochondrial) Details for - - aspartyl-tRNA synthetase 2 (mitochondrial) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 226539 Tuberculist Genomic Region	228983 oxysterol binding protein-like 2 Details for RP23-16P3.1 - oxysterol binding protein-like 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 228983 Tuberculist Genomic Region
239570 tetratricopeptide repeat domain 38 Details for - - tetratricopeptide repeat domain 38 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 239570 Tuberculist Genomic Region	270076 glutaryl-Coenzyme A dehydrogenase Details for - - glutaryl-Coenzyme A dehydrogenase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 270076 Tuberculist Genomic Region
64291 oxysterol binding protein-like 1A Details for - - oxysterol binding protein-like 1A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 64291 Tuberculist Genomic Region	66948 acyl-Coenzyme A dehydrogenase family, member 8 Details for - - acyl-Coenzyme A dehydrogenase family, member 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66948 Tuberculist Genomic Region
68472 transmembrane protein 126B Details for - - transmembrane protein 126B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68472 Tuberculist Genomic Region	77032 thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 Details for - - thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 77032 Tuberculist Genomic Region
106326 oxysterol binding protein-like 11 Details for - - oxysterol binding protein-like 11 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 106326 Tuberculist Genomic Region	12576 cyclin-dependent kinase inhibitor 1B Details for - - cyclin-dependent kinase inhibitor 1B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12576 Tuberculist Genomic Region
17850 methylmalonyl-Coenzyme A mutase Details for - - methylmalonyl-Coenzyme A mutase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17850 Tuberculist Genomic Region	19687 replication factor C (activator 1) 1 Details for - - replication factor C (activator 1) 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19687 Tuberculist Genomic Region
231670 F-box protein 21 Details for - - F-box protein 21 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 231670 Tuberculist Genomic Region	641376 translocase of outer mitochondrial membrane 40 homolog-like (yeast) Details for - - translocase of outer mitochondrial membrane 40 homolog-like (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 641376 Tuberculist Genomic Region
67826 synaptosomal-associated protein, 47 Details for RP23-378H5.4 - synaptosomal-associated protein, 47 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67826 Tuberculist Genomic Region	68767 WAS protein family homolog Details for - - WAS protein family homolog GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68767 Tuberculist Genomic Region
75415 Rho GTPase activating protein 12 Details for - - Rho GTPase activating protein 12 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75415 Tuberculist Genomic Region	76608 HECT domain containing 3 Details for RP23-419D6.4 - HECT domain containing 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76608 Tuberculist Genomic Region
13185 Down syndrome critical region gene 3 Details for - - Down syndrome critical region gene 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13185 Tuberculist Genomic Region	208194 endo/exonuclease (5'-3'), endonuclease G-like Details for - - endo/exonuclease (5'-3'), endonuclease G-like GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 208194 Tuberculist Genomic Region
74114 carnitine O-octanoyltransferase Details for - - carnitine O-octanoyltransferase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74114 Tuberculist Genomic Region	74551 phosphoenolpyruvate carboxykinase 2 (mitochondrial) Details for - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74551 Tuberculist Genomic Region
79221 histone deacetylase 9 Details for - - histone deacetylase 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 79221 Tuberculist Genomic Region

Summary

Members

Details for mCG_130134 - RIKEN cDNA 1700021K19 gene

Details for RP23-382C18.2 - methionine adenosyltransferase II, beta

Details for - - glutamic pyruvate transaminase (alanine aminotransferase) 2

Details for - - cytidine monophospho-N-acetylneuraminic acid synthetase

Details for - - helicase-like transcription factor

Details for - - sphingomyelin phosphodiesterase 2, neutral

Details for - - lectin, mannose-binding 2-like

Details for - - ras homolog gene family, member T2

Details for - - AHA1, activator of heat shock protein ATPase 1

Details for - - xeroderma pigmentosum, complementation group C

Details for RP23-157O3.2 - mitochondrial ribosomal protein S35

Details for - - TBC1 domain family, member 17

Details for - - F-box and WD-40 domain protein 4

Details for - - polymerase (RNA) II (DNA directed) polypeptide G

Details for RP23-92B18.3 - prolyl-tRNA synthetase domain containing 1

Details for AL603864.1 - HMG box domain containing 4

Details for - - vacuolar protein sorting 11 (yeast)

Details for - - zinc finger, CCHC domain containing 24

Details for - - methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)

Details for - - protein phosphatase 1, regulatory subunit 21

Details for - - kinesin light chain 4

Details for RP23-319B15.5 - TBC1 domain family, member 9B

Details for - - enoyl Coenzyme A hydratase, short chain, 1, mitochondrial

Details for RP23-153M14.7 - zinc finger, MYM-type 6

Details for - - serine/threonine kinase 38

Details for RP23-395H4.3 - caspase 9

Details for - - Ras association (RalGDS/AF-6) domain family member 3

Details for - - tetratricopeptide repeat domain 7

Details for - - zinc finger protein 961

Details for - - cyclin-dependent kinase 10

Details for - - differentially expressed in FDCP 8

Details for - - mitogen-activated protein kinase kinase kinase 1

Details for - - transmembrane protein 218

Details for RP23-100C7.1 - nudix (nucleoside diphosphate linked moiety X)-type motif 2

Details for - - methyltransferase like 21A

Details for DN-183N8.14-002 - ring finger protein 167

Details for RP23-391A14.5 - RIKEN cDNA 1110034G24 gene

Details for RP23-244N6.5 - actin related protein 2/3 complex, subunit 5-like

Details for - - RIKEN cDNA 2810008D09 gene

Details for - - HscB iron-sulfur cluster co-chaperone homolog (E. coli)

Details for - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)

Details for - - adducin 1 (alpha)

Details for - - serine/arginine-rich protein specific kinase 2

Details for - - ankyrin repeat and MYND domain containing 2

Details for - - aspartyl-tRNA synthetase 2 (mitochondrial)

Details for RP23-16P3.1 - oxysterol binding protein-like 2

Details for - - tetratricopeptide repeat domain 38

Details for - - glutaryl-Coenzyme A dehydrogenase

Details for - - oxysterol binding protein-like 1A

Details for - - acyl-Coenzyme A dehydrogenase family, member 8

Details for - - transmembrane protein 126B

Details for - - thiosulfate sulfurtransferase (rhodanese)-like domain containing 3

Details for - - oxysterol binding protein-like 11

Details for - - cyclin-dependent kinase inhibitor 1B

Details for - - methylmalonyl-Coenzyme A mutase

Details for - - replication factor C (activator 1) 1

Details for - - F-box protein 21

Details for - - translocase of outer mitochondrial membrane 40 homolog-like (yeast)

Details for RP23-378H5.4 - synaptosomal-associated protein, 47

Details for - - WAS protein family homolog

Details for - - Rho GTPase activating protein 12

Details for RP23-419D6.4 - HECT domain containing 3

Details for - - Down syndrome critical region gene 3

Details for - - endo/exonuclease (5'-3'), endonuclease G-like

Details for - - carnitine O-octanoyltransferase

Details for - - phosphoenolpyruvate carboxykinase 2 (mitochondrial)

Details for - - histone deacetylase 9

GO Terms

3p UTR PITA