PITA_111 megaCluster: 10 Residual: 0.23

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_111 10 0.23 9 0 0.673529 0.872
Displaying 1 - 48 of 48
108037 serine hydroxymethyltransferase 2 (mitochondrial)

Details for - - serine hydroxymethyltransferase 2 (mitochondrial)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108037

Tuberculist Genomic Region

117198 influenza virus NS1A binding protein

Details for - - influenza virus NS1A binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 117198

Tuberculist Genomic Region

14360 Fyn proto-oncogene

Details for - - Fyn proto-oncogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14360

Tuberculist Genomic Region

14886 general transcription factor II I

Details for - - general transcription factor II I

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14886

Tuberculist Genomic Region

15216 hemochromatosis

Details for RP23-480B19.9 - hemochromatosis

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15216

Tuberculist Genomic Region

17345 antigen identified by monoclonal antibody Ki 67

Details for - - antigen identified by monoclonal antibody Ki 67

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17345

Tuberculist Genomic Region

192654 phospholipase A2, group XV

Details for - - phospholipase A2, group XV

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 192654

Tuberculist Genomic Region

207818 small cell adhesion glycoprotein

Details for - - small cell adhesion glycoprotein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 207818

Tuberculist Genomic Region

217340 ring finger protein 157

Details for RP23-184G6.4 - ring finger protein 157

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217340

Tuberculist Genomic Region

228482 Rho GTPase activating protein 11A

Details for RP23-288M21.5 - Rho GTPase activating protein 11A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228482

Tuberculist Genomic Region

29869 unc-51 like kinase 2

Details for RP23-278F12.5 - unc-51 like kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 29869

Tuberculist Genomic Region

319504 neuron-glia-CAM-related cell adhesion molecule

Details for - - neuron-glia-CAM-related cell adhesion molecule

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319504

Tuberculist Genomic Region

330812 ring finger protein 150

Details for - - ring finger protein 150

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 330812

Tuberculist Genomic Region

60455 transmembrane protein 8 (five membrane-spanning domains)

Details for - - transmembrane protein 8 (five membrane-spanning domains)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60455

Tuberculist Genomic Region

637515 NLR family, pyrin domain containing 1B

Details for DN-72H10.1 - NLR family, pyrin domain containing 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 637515

Tuberculist Genomic Region

68137 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1

Details for - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68137

Tuberculist Genomic Region

70974 phosphoglucomutase 2-like 1

Details for - - phosphoglucomutase 2-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70974

Tuberculist Genomic Region

72117 N(alpha)-acetyltransferase 50, NatE catalytic subunit

Details for - - N(alpha)-acetyltransferase 50, NatE catalytic subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72117

Tuberculist Genomic Region

74149 zinc finger protein 946

Details for - - zinc finger protein 946

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74149

Tuberculist Genomic Region

94275 melanoma antigen, family D, 1

Details for RP23-272D10.5 - melanoma antigen, family D, 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 94275

Tuberculist Genomic Region

102141 sorting nexin 25

Details for - - sorting nexin 25

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 102141

Tuberculist Genomic Region

104923 acireductone dioxygenase 1

Details for - - acireductone dioxygenase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104923

Tuberculist Genomic Region

105171 arrestin domain containing 3

Details for - - arrestin domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 105171

Tuberculist Genomic Region

107476 acetyl-Coenzyme A carboxylase alpha

Details for RP23-123O10.1 - acetyl-Coenzyme A carboxylase alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107476

Tuberculist Genomic Region

108012 adaptor-related protein complex 1, sigma 2 subunit

Details for RP23-391L6.1 - adaptor-related protein complex 1, sigma 2 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108012

Tuberculist Genomic Region

108961 E2F transcription factor 8

Details for - - E2F transcription factor 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108961

Tuberculist Genomic Region

114128 lysosomal-associated protein transmembrane 4B

Details for - - lysosomal-associated protein transmembrane 4B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 114128

Tuberculist Genomic Region

11856 Rho GTPase activating protein 6

Details for RP23-24O15.2 - Rho GTPase activating protein 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11856

Tuberculist Genomic Region

12628 complement component factor h

Details for - - complement component factor h

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12628

Tuberculist Genomic Region

13204 DEAH (Asp-Glu-Ala-His) box polypeptide 15

Details for - - DEAH (Asp-Glu-Ala-His) box polypeptide 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13204

Tuberculist Genomic Region

17001 leukotriene C4 synthase

Details for RP23-319B15.7 - leukotriene C4 synthase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17001

Tuberculist Genomic Region

19128 protein S (alpha)

Details for - - protein S (alpha)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19128

Tuberculist Genomic Region

19684 radixin

Details for - - radixin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19684

Tuberculist Genomic Region

20336 exocyst complex component 4

Details for - - exocyst complex component 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20336

Tuberculist Genomic Region

268930 protein kinase, membrane associated tyrosine/threonine 1

Details for - - protein kinase, membrane associated tyrosine/threonine 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 268930

Tuberculist Genomic Region

320209 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11

Details for - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320209

Tuberculist Genomic Region

382406 POC1 centriolar protein homolog B (Chlamydomonas)

Details for - - POC1 centriolar protein homolog B (Chlamydomonas)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 382406

Tuberculist Genomic Region

56421 phosphofructokinase, platelet

Details for - - phosphofructokinase, platelet

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56421

Tuberculist Genomic Region

59013 heterogeneous nuclear ribonucleoprotein H1

Details for RP23-121P11.1 - heterogeneous nuclear ribonucleoprotein H1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 59013

Tuberculist Genomic Region

619883 predicted gene 6109

Details for - - predicted gene 6109

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 619883

Tuberculist Genomic Region

66200 COMM domain containing 6

Details for - - COMM domain containing 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66200

Tuberculist Genomic Region

67705 RIKEN cDNA 1810058I24 gene

Details for - - RIKEN cDNA 1810058I24 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67705

Tuberculist Genomic Region

68743 anillin, actin binding protein

Details for - - anillin, actin binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68743

Tuberculist Genomic Region

68801 ELOVL family member 5, elongation of long chain fatty acids (yeast)

Details for - - ELOVL family member 5, elongation of long chain fatty acids (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68801

Tuberculist Genomic Region

75292 protein kinase D3

Details for - - protein kinase D3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75292

Tuberculist Genomic Region

12567 cyclin-dependent kinase 4

Details for - - cyclin-dependent kinase 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12567

Tuberculist Genomic Region

65964 sterile alpha motif and leucine zipper containing kinase AZK

Details for RP23-146F24.1 - sterile alpha motif and leucine zipper containing kinase AZK

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 65964

Tuberculist Genomic Region

13860 epidermal growth factor receptor pathway substrate 8

Details for - - epidermal growth factor receptor pathway substrate 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13860

Tuberculist Genomic Region

TFs percTargets pValue
E2F1_MA0024.1 0.217391 0.000000552
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.0000000000013 AAAAMNAAAAAA NA 9.7 TTAACATTNNT NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.08 GACGCG NA 1.04 GCGCTNCG NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.45 ACGACG NA NA 0.59 TANGACGT NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-543 0.692308 0.0000592
miRNAs percTargets pValue
NA
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