PITA_143 megaCluster: 11 Residual: 0.15 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_143	11	0.15	15	0	0.958679	0

Members

Displaying 1 - 20 of 20

12236 budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae) Details for RP23-204G5.1 - budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12236 Tuberculist Genomic Region	246102 rotatin Details for - - rotatin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 246102 Tuberculist Genomic Region
54392 non-SMC condensin I complex, subunit G Details for - - non-SMC condensin I complex, subunit G GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54392 Tuberculist Genomic Region	66578 MIS18 kinetochore protein homolog A (S. pombe) Details for - - MIS18 kinetochore protein homolog A (S. pombe) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66578 Tuberculist Genomic Region
72050 KDEL (Lys-Asp-Glu-Leu) containing 1 Details for - - KDEL (Lys-Asp-Glu-Leu) containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72050 Tuberculist Genomic Region	114663 inositol (myo)-1(or 4)-monophosphatase 2 Details for - - inositol (myo)-1(or 4)-monophosphatase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 114663 Tuberculist Genomic Region
12531 cell division cycle 25B Details for RP23-387C21.1 - cell division cycle 25B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12531 Tuberculist Genomic Region	14211 structural maintenance of chromosomes 2 Details for RP23-122I3.3 - structural maintenance of chromosomes 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14211 Tuberculist Genomic Region
16970 lymphoid-restricted membrane protein Details for RP24-216M19.3 - lymphoid-restricted membrane protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16970 Tuberculist Genomic Region	19366 RAD54 like (S. cerevisiae) Details for RP23-383D12.1 - RAD54 like (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19366 Tuberculist Genomic Region
216134 pyridoxal (pyridoxine, vitamin B6) kinase Details for - - pyridoxal (pyridoxine, vitamin B6) kinase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 216134 Tuberculist Genomic Region	381318 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) Details for - - NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 381318 Tuberculist Genomic Region
54141 sperm associated antigen 5 Details for RP23-185A18.13-001 - sperm associated antigen 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54141 Tuberculist Genomic Region	623474 RAD54 homolog B (S. cerevisiae) Details for RP23-242O9.3 - RAD54 homolog B (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 623474 Tuberculist Genomic Region
66934 DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) Details for RP23-430P1.2 - DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66934 Tuberculist Genomic Region	67872 non-SMC element 4 homolog A (S. cerevisiae) Details for - - non-SMC element 4 homolog A (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67872 Tuberculist Genomic Region
68298 non-SMC condensin I complex, subunit D2 Details for - - non-SMC condensin I complex, subunit D2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68298 Tuberculist Genomic Region	72415 shugoshin-like 1 (S. pombe) Details for - - shugoshin-like 1 (S. pombe) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72415 Tuberculist Genomic Region
75597 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75597 Tuberculist Genomic Region	76044 non-SMC condensin II complex, subunit G2 Details for - - non-SMC condensin II complex, subunit G2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76044 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_SP1_Q4_01_M00932	1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
65	GGGCKGARCCTG	NA	8400	STGTCTKTKYNT	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.53	AACGCG	NA	1.67	GACGCGTT	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.8	TCCCATGA	NA	NA		NA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

Add comment

Log in or register to post comments