PITA_160 megaCluster: 11 Residual: 0.21

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_160 11 0.21 15 0 0.904276 0
Displaying 1 - 32 of 32
109900 argininosuccinate lyase

Details for - - argininosuccinate lyase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109900

Tuberculist Genomic Region

16774 laminin, alpha 3

Details for - - laminin, alpha 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16774

Tuberculist Genomic Region

19139 phosphoribosyl pyrophosphate synthetase 1

Details for RP23-137E3.3 - phosphoribosyl pyrophosphate synthetase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19139

Tuberculist Genomic Region

216987 UTP6, small subunit (SSU) processome component, homolog (yeast)

Details for RP23-253E9.3 - UTP6, small subunit (SSU) processome component, homolog (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216987

Tuberculist Genomic Region

227620 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1

Details for RP23-47P18.3 - UDP-N-acteylglucosamine pyrophosphorylase 1-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227620

Tuberculist Genomic Region

66818 small integral membrane protein 7

Details for - - small integral membrane protein 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66818

Tuberculist Genomic Region

68636 fumarylacetoacetate hydrolase domain containing 1

Details for MNCb-4134 - fumarylacetoacetate hydrolase domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68636

Tuberculist Genomic Region

71706 solute carrier family 46, member 3

Details for - - solute carrier family 46, member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71706

Tuberculist Genomic Region

72103 aprataxin and PNKP like factor

Details for - - aprataxin and PNKP like factor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72103

Tuberculist Genomic Region

100503386 predicted gene 4980

Details for - - predicted gene 4980

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503386

Tuberculist Genomic Region

110446 acetyl-Coenzyme A acetyltransferase 1

Details for - - acetyl-Coenzyme A acetyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110446

Tuberculist Genomic Region

13194 damage specific DNA binding protein 1

Details for - - damage specific DNA binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13194

Tuberculist Genomic Region

20719 serine (or cysteine) peptidase inhibitor, clade B, member 6a

Details for RP23-262J21.1 - serine (or cysteine) peptidase inhibitor, clade B, member 6a

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20719

Tuberculist Genomic Region

211986 transmembrane protein 18

Details for - - transmembrane protein 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 211986

Tuberculist Genomic Region

212285 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2

Details for - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 212285

Tuberculist Genomic Region

230145 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12

Details for RP23-337N2.6 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230145

Tuberculist Genomic Region

24014 ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)

Details for - - ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 24014

Tuberculist Genomic Region

245670 Ras-related GTP binding B

Details for RP23-180D16.3 - Ras-related GTP binding B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 245670

Tuberculist Genomic Region

28040 DNA segment, Chr 6, Wayne State University 163, expressed

Details for - - DNA segment, Chr 6, Wayne State University 163, expressed

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28040

Tuberculist Genomic Region

56786 TMEM9 domain family, member B

Details for - - TMEM9 domain family, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56786

Tuberculist Genomic Region

57344 arsenic (+3 oxidation state) methyltransferase

Details for - - arsenic (+3 oxidation state) methyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57344

Tuberculist Genomic Region

58248 RIKEN cDNA 1700123O20 gene

Details for MNCb-2990 - RIKEN cDNA 1700123O20 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58248

Tuberculist Genomic Region

67201 glyoxalase domain containing 4

Details for RP23-147P4.6 - glyoxalase domain containing 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67201

Tuberculist Genomic Region

67834 isocitrate dehydrogenase 3 (NAD+) alpha

Details for - - isocitrate dehydrogenase 3 (NAD+) alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67834

Tuberculist Genomic Region

74600 mitochondrial ribosomal protein L47

Details for - - mitochondrial ribosomal protein L47

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74600

Tuberculist Genomic Region

66335 ATPase, H+ transporting, lysosomal V1 subunit C1

Details for - - ATPase, H+ transporting, lysosomal V1 subunit C1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66335

Tuberculist Genomic Region

50799 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13

Details for - - solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 50799

Tuberculist Genomic Region

233056 zinc finger protein 790

Details for - - zinc finger protein 790

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233056

Tuberculist Genomic Region

68839 ankyrin repeat domain 46

Details for - - ankyrin repeat domain 46

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68839

Tuberculist Genomic Region

109778 biliverdin reductase A

Details for RP23-26A12.2 - biliverdin reductase A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109778

Tuberculist Genomic Region

226646 NADH dehydrogenase (ubiquinone) Fe-S protein 2

Details for - - NADH dehydrogenase (ubiquinone) Fe-S protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226646

Tuberculist Genomic Region

66455 canopy 4 homolog (zebrafish)

Details for - - canopy 4 homolog (zebrafish)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66455

Tuberculist Genomic Region

TFs percTargets pValue
ESRRB_nuclearreceptor_DBD_monomeric_11_1 0.40625 0.000018
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.17 ATCGCG NA 1.27 GGCTTCCG NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.73 CCTGTTAA NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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